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The map label for this gene is ybjT [C]

Identifier: 88658323

GI number: 88658323

Start: 57435

End: 58397

Strand: Direct

Name: ybjT [C]

Synonym: ECH_0063

Alternate gene names: 88658323

Gene position: 57435-58397 (Clockwise)

Preceding gene: 88658514

Following gene: 88657935

Centisome position: 4.88

GC content: 30.74

Gene sequence:

>963_bases
ATGTCTATAAAGCGTGTCGTTATGTTTGGGGGGAGTGGTTTTATAGGTAGATACTTAGTAAAGTACTTTGCTGAGAATGG
GTATGTGATTAGGATTGTTACTAGATATCCAGAAAAAGCAAAGCAATTAAAGTTATGTGGGAATTTGGGTCAAGTAGAGG
TTATAAGTGGTAATGTTGCTAATAGTGAAGAAGTAATTGAGCATATACGTGATTGTAATATTGTTATAAATTTACTTGGT
GTTTTATATAGTGCAAAGAAATCTACTTTTTATGACATACATGCTAAAGCAGCAGAAAATATAGCTAAAGCTGCAAAAAG
GTGTAAAGTAAAGTTGATGATTCATTTTTCGGCAATGGGAATTACTGAAACACAAAAATCTGACTATGCGAAAAGTAAAT
TGATAGGGGAAAATCTTGTGAAATCTGCTTTCCCTGATGCAGTGATTATAAGGCCAAACTTAGTTTTTGGACCAGAAGAT
AAGTTTTTTAATAAGTTTGCACAGCTGTCAATGATTTTTCCATTTTTGCCGGTTATAGGCGGTGGACGTGCAGTTTTCCA
ACCTATTTATGTTGATGATCTTGCTAAGTTTGTATTTAGTATTGTTGAAAATTCGATTACAGATAAGCTATATAATGTTT
GTGGGCCTTGTACTTATTCATTTAAAGAGTTATTAAGTTTTATCCTGAACGTTACAAATAGAAAAAGTAAGCTTATTAAT
ATTTCTTTTGGTGTAACAAATATTTTAGCTTTTTTTTGTGAGCTGAGAATAATTTCTATTTTTTTGAAACTTATTACTGG
AACTACAGATCCAATTTTAACAAGAGATCAGGTGAAATTTATTAAAGATATGACCGAATCTCATGATATATACCCTATGA
ATGAGTTAAAAGAGATTGGAGTAAAGTTGTCAACTATTGAAAACATAGTTCCTAAATATTTAAAGATTTATAAGAGTTTT
TAG

Upstream 100 bases:

>100_bases
GTGATCTTAATTTTGTAGGAGTTATTTTTTCTCAGGCTTTTGTATAAAAACTATGAAGTTGTTTCTGTAATTGTTGTTAC
TGTGAAGTTGAGGTATTAGT

Downstream 100 bases:

>100_bases
TATTATAGCTATATGTTTGCATTTGATGCTTATTTTAGAAAAGTTTAGATGTAATTTTTTGAAGATGTGGAGTATCTCTC
ATTCCTTAAATAGGTGAAAT

Product: putative NADH-ubiquinone oxidoreductase,-like protein

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; Oxidoreductase Protein; NAD Dependent Epimerase/Dehydratase/Dehydrogenase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; NADH-Ubiquinone Oxidoreductase Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; NADH Dehydrogenase/Oxidoreductase-Like Protein; Transmembrane Oxidoreductase Protein; NmrA Family Protein; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSIKRVVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEKAKQLKLCGNLGQVEVISGNVANSEEVIEHIRDCNIVINLLG
VLYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMGITETQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPED
KFFNKFAQLSMIFPFLPVIGGGRAVFQPIYVDDLAKFVFSIVENSITDKLYNVCGPCTYSFKELLSFILNVTNRKSKLIN
ISFGVTNILAFFCELRIISIFLKLITGTTDPILTRDQVKFIKDMTESHDIYPMNELKEIGVKLSTIENIVPKYLKIYKSF

Sequences:

>Translated_320_residues
MSIKRVVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEKAKQLKLCGNLGQVEVISGNVANSEEVIEHIRDCNIVINLLG
VLYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMGITETQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPED
KFFNKFAQLSMIFPFLPVIGGGRAVFQPIYVDDLAKFVFSIVENSITDKLYNVCGPCTYSFKELLSFILNVTNRKSKLIN
ISFGVTNILAFFCELRIISIFLKLITGTTDPILTRDQVKFIKDMTESHDIYPMNELKEIGVKLSTIENIVPKYLKIYKSF
>Mature_319_residues
SIKRVVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEKAKQLKLCGNLGQVEVISGNVANSEEVIEHIRDCNIVINLLGV
LYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMGITETQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPEDK
FFNKFAQLSMIFPFLPVIGGGRAVFQPIYVDDLAKFVFSIVENSITDKLYNVCGPCTYSFKELLSFILNVTNRKSKLINI
SFGVTNILAFFCELRIISIFLKLITGTTDPILTRDQVKFIKDMTESHDIYPMNELKEIGVKLSTIENIVPKYLKIYKSF

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=317, Percent_Identity=28.0757097791798, Blast_Score=136, Evalue=3e-32,
Organism=Escherichia coli, GI87081793, Length=250, Percent_Identity=18.8, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17556106, Length=236, Percent_Identity=32.2033898305085, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24667554, Length=326, Percent_Identity=27.6073619631902, Blast_Score=138, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36083; Mature: 35952

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKRVVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEKAKQLKLCGNLGQVEVISGNVA
CCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCC
NSEEVIEHIRDCNIVINLLGVLYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECC
ITETQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPEDKFFNKFAQLSMIFPFLPVIG
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCC
GGRAVFQPIYVDDLAKFVFSIVENSITDKLYNVCGPCTYSFKELLSFILNVTNRKSKLIN
CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
ISFGVTNILAFFCELRIISIFLKLITGTTDPILTRDQVKFIKDMTESHDIYPMNELKEIG
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC
VKLSTIENIVPKYLKIYKSF
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIKRVVMFGGSGFIGRYLVKYFAENGYVIRIVTRYPEKAKQLKLCGNLGQVEVISGNVA
CCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCC
NSEEVIEHIRDCNIVINLLGVLYSAKKSTFYDIHAKAAENIAKAAKRCKVKLMIHFSAMG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECC
ITETQKSDYAKSKLIGENLVKSAFPDAVIIRPNLVFGPEDKFFNKFAQLSMIFPFLPVIG
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHCC
GGRAVFQPIYVDDLAKFVFSIVENSITDKLYNVCGPCTYSFKELLSFILNVTNRKSKLIN
CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEE
ISFGVTNILAFFCELRIISIFLKLITGTTDPILTRDQVKFIKDMTESHDIYPMNELKEIG
EECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHC
VKLSTIENIVPKYLKIYKSF
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA