| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658318
Identifier: 88658318
GI number: 88658318
Start: 338246
End: 338854
Strand: Direct
Name: 88658318
Synonym: ECH_0348
Alternate gene names: NA
Gene position: 338246-338854 (Clockwise)
Preceding gene: 88658252
Following gene: 88658143
Centisome position: 28.76
GC content: 29.39
Gene sequence:
>609_bases ATGAAGATACAAAATGCTATATTTTTTTTGCTAATGCTGCAAGCTTCCTGTAGCCCTATTTATGGTATTAAAAAAGAATA TAAAGGACCGGAAAATGAATCTGGAAAAGCTTGTGTAGTAAAGTGTGCTTACGTAAGAAATGACTGTTATAGGCAGTGCC AAGTTGATATGACAAATTGTCAATTAACTGAAAAAATGATCAATGCTCAAGAGCGTTCTCAACCACTTGTGAGTATAATA AATAGTAATGGAAACAAACAAAATAATAACTTGAAGAATAATAATGGTCACCCATGTAAAAGTGAGAACATAAAATGTAA GGAGTCTTGTTCTAGTGATATTATGTGTAAGACTCAATGCGATATGTATATGGATATGTGTAATGCTCAGCAAAATTTTA ATGGTCATGACAAATACGATAACTTTGTTTCAAGTATAGATAAAAAAAGCGCAAACATCACAGTAAGAAAACAAAATTCT ATTAGCTTATGCAGTAGTAATAAATGTGATAGATTATGTACAAATAATTATGATTTATGTTTTTCTAGTTGTGGTGGACA AATAATTACTTATAAACAGTGTGTAGCATTTTGTGATAAAAATAAATAA
Upstream 100 bases:
>100_bases ATTAAGTAATACATAAGTTATTTAAATTACTAATAATATTATTTATATTTTAATAAATATGTAGTAGTTTATTACCTTAT GCTAAGGTGTGGTAATTTTA
Downstream 100 bases:
>100_bases TTATTTTCTACCTTTATTGTATAAATAAAACTAATGAATAATTTTATAAATAGTTTGTATTTCTAGTGTTAATGAAAGTT GTCATTACCTTGTTAGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MKIQNAIFFLLMLQASCSPIYGIKKEYKGPENESGKACVVKCAYVRNDCYRQCQVDMTNCQLTEKMINAQERSQPLVSII NSNGNKQNNNLKNNNGHPCKSENIKCKESCSSDIMCKTQCDMYMDMCNAQQNFNGHDKYDNFVSSIDKKSANITVRKQNS ISLCSSNKCDRLCTNNYDLCFSSCGGQIITYKQCVAFCDKNK
Sequences:
>Translated_202_residues MKIQNAIFFLLMLQASCSPIYGIKKEYKGPENESGKACVVKCAYVRNDCYRQCQVDMTNCQLTEKMINAQERSQPLVSII NSNGNKQNNNLKNNNGHPCKSENIKCKESCSSDIMCKTQCDMYMDMCNAQQNFNGHDKYDNFVSSIDKKSANITVRKQNS ISLCSSNKCDRLCTNNYDLCFSSCGGQIITYKQCVAFCDKNK >Mature_202_residues MKIQNAIFFLLMLQASCSPIYGIKKEYKGPENESGKACVVKCAYVRNDCYRQCQVDMTNCQLTEKMINAQERSQPLVSII NSNGNKQNNNLKNNNGHPCKSENIKCKESCSSDIMCKTQCDMYMDMCNAQQNFNGHDKYDNFVSSIDKKSANITVRKQNS ISLCSSNKCDRLCTNNYDLCFSSCGGQIITYKQCVAFCDKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22849; Mature: 22849
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 13.4 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 13.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQNAIFFLLMLQASCSPIYGIKKEYKGPENESGKACVVKCAYVRNDCYRQCQVDMTNC CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHH QLTEKMINAQERSQPLVSIINSNGNKQNNNLKNNNGHPCKSENIKCKESCSSDIMCKTQC HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEHHHH DMYMDMCNAQQNFNGHDKYDNFVSSIDKKSANITVRKQNSISLCSSNKCDRLCTNNYDLC HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCHHHCCCCCCH FSSCGGQIITYKQCVAFCDKNK HHCCCCCEEEHHHHHHHHCCCC >Mature Secondary Structure MKIQNAIFFLLMLQASCSPIYGIKKEYKGPENESGKACVVKCAYVRNDCYRQCQVDMTNC CCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCHHH QLTEKMINAQERSQPLVSIINSNGNKQNNNLKNNNGHPCKSENIKCKESCSSDIMCKTQC HHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEHHHH DMYMDMCNAQQNFNGHDKYDNFVSSIDKKSANITVRKQNSISLCSSNKCDRLCTNNYDLC HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEECCCCCCCCHHHCCCCCCH FSSCGGQIITYKQCVAFCDKNK HHCCCCCEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA