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The map label for this gene is yrbE [C]

Identifier: 88658302

GI number: 88658302

Start: 75298

End: 76125

Strand: Direct

Name: yrbE [C]

Synonym: ECH_0084

Alternate gene names: 88658302

Gene position: 75298-76125 (Clockwise)

Preceding gene: 88657621

Following gene: 88658167

Centisome position: 6.4

GC content: 32.97

Gene sequence:

>828_bases
GTGCTGCTTAAAAGTATTTGGTGTATTATTATGCGATTTTTGTGTTTACATTTGGTGCCGTTTTGGTTGTTAGAAACTAT
TGGTAGATATGTAATAAATGTCATTTTTAATGTAGGACACTCTTTTATTTTTTTTGTGAAGTTTGTATATAATTGTTTTG
TGCCTCCTTATTACTATGGGGTTATATTAAAACAGTTTATAGAGATATTCTTTTTCTCACTTCCTATAGTTGGCATAACT
GCTATATTTACTGGTGCGGTTTTAATTTTACAGAACTCTTTGATAATACATAATAATGTTTCAGGTGATTTTGTTTCAGG
AGTTGTTGTTGTTGCGATCGTAAGAGAACTAGGGCCAGTATTAATTGGTCTGATTATTGCAGGACGTGTGGGAGCAGCTA
TTGCTGCTGAAATAGGTACTATGCGTATTACTGAACAAATAGATGCTTTGTTTACATTAGATACTAATCCATTCAAATAT
TTAGTCGTTCCTCGTATTATTTCTGCAATGGTTGCTATGCCTATATTGATTTTGTGTGCTGATTTAATTGGTGCTTATGG
TGGATACATTGTTGGCTCGTATCAGTTGGGGTATACTTCTGAAATGTATATTAAAGGAGTAATAAAATTTTTACATGCTA
AAGATGTGGCTTTAGGTTTGGTTAAGGCTACGGTGTTTGGCTTTATAATATCCTTTATGGGGTGCTATAGTGGCTATTAT
TGTAGTGGTGGAGCTAGAGGTGTTGGATTGGCTACTACTTATGTTGTTGTTGTGTCATCCATGTTTATCATCTTATTCAA
TTATATTATTACTGTATTTTATTCATAG

Upstream 100 bases:

>100_bases
GCATTGATATTAGTGTAAGTATTTTTATACCTGTTAAAATAAAAGGTTTTATTGTTGCGAGCAGTAGATTGTAATGGATT
GATAGACAGTTTATTTATGT

Downstream 100 bases:

>100_bases
TAGTTGATTTTATGAATTATATTTCTTTATCTGATTTGCATATAGACTTTCATGGACATCAAGTATTGAAGGGAATAAGT
CTTGATATTGCATATGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLLKSIWCIIMRFLCLHLVPFWLLETIGRYVINVIFNVGHSFIFFVKFVYNCFVPPYYYGVILKQFIEIFFFSLPIVGIT
AIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIAAEIGTMRITEQIDALFTLDTNPFKY
LVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYY
CSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS

Sequences:

>Translated_275_residues
MLLKSIWCIIMRFLCLHLVPFWLLETIGRYVINVIFNVGHSFIFFVKFVYNCFVPPYYYGVILKQFIEIFFFSLPIVGIT
AIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIAAEIGTMRITEQIDALFTLDTNPFKY
LVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYY
CSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS
>Mature_275_residues
MLLKSIWCIIMRFLCLHLVPFWLLETIGRYVINVIFNVGHSFIFFVKFVYNCFVPPYYYGVILKQFIEIFFFSLPIVGIT
AIFTGAVLILQNSLIIHNNVSGDFVSGVVVVAIVRELGPVLIGLIIAGRVGAAIAAEIGTMRITEQIDALFTLDTNPFKY
LVVPRIISAMVAMPILILCADLIGAYGGYIVGSYQLGYTSEMYIKGVIKFLHAKDVALGLVKATVFGFIISFMGCYSGYY
CSGGARGVGLATTYVVVVSSMFIILFNYIITVFYS

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=255, Percent_Identity=26.2745098039216, Blast_Score=110, Evalue=8e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30347; Mature: 30347

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA