| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658202
Identifier: 88658202
GI number: 88658202
Start: 550236
End: 550823
Strand: Direct
Name: 88658202
Synonym: ECH_0549
Alternate gene names: NA
Gene position: 550236-550823 (Clockwise)
Preceding gene: 88658598
Following gene: 88658094
Centisome position: 46.78
GC content: 34.18
Gene sequence:
>588_bases ATGCACTTAACGTTATTGTTGCTTAGAAATGGTATGCCTGTTTTGTTACCTGAAGCAGCATGTAAGTATGATAAGAGTCT AGGCGTTGCTTATACAATGGATCCCATTATGAATGAGCAATTAGGGATTCCTACATCAGATAGTCCTTATAGTTATCTAT ATAGGTCAAACTTTACAAAGTTTGCTGTTGTAAGTGGTGCAAATTCTGAGATGAATGTAATGTTTATTTTTGGTAATAGT CCAGTATTATCTTGTCCTGTATTTATGGTCTTTACACTTCCATATGGCGTTGTTCGTGATGTAACAAAGAATGGTATAAT GTTAGATAATACATTGATCCCGTTACATGGAAAAGTTAGTGAAGACTTGTTAGGTCTTTCAACAGAAGAGCAAGTGATCA AGTTATTTAATGAGTTAAAAAGTAATCTCAAAATAAATGCAAGTTCTGGGCAGTGTCGTATGCAGATGTTTAACTATGTT AATGGGAATGGTGAGTTGTTTCACACATCATTTCATAATACAGCTTTGGATAGAGTAACCGTGAATCCTGTAGATGGTAG TAGACGATATATTATGAAGATAGAATAG
Upstream 100 bases:
>100_bases TAATTATTTTTTATATAATTTTTAACTAAATAGGTGTAATATATACTTTAATTTTATTATTATTAATAAAGATATTAATA ATTTTAAGTTTGGAGTTAAT
Downstream 100 bases:
>100_bases AGATTTAGTTTTATAGAATTATTTTTAAGATTGTGATGAGTAATAAAAAGCTATAATTCTATTTATTAAGAATAAATTTT TTTAGTAGAACTTATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MHLTLLLLRNGMPVLLPEAACKYDKSLGVAYTMDPIMNEQLGIPTSDSPYSYLYRSNFTKFAVVSGANSEMNVMFIFGNS PVLSCPVFMVFTLPYGVVRDVTKNGIMLDNTLIPLHGKVSEDLLGLSTEEQVIKLFNELKSNLKINASSGQCRMQMFNYV NGNGELFHTSFHNTALDRVTVNPVDGSRRYIMKIE
Sequences:
>Translated_195_residues MHLTLLLLRNGMPVLLPEAACKYDKSLGVAYTMDPIMNEQLGIPTSDSPYSYLYRSNFTKFAVVSGANSEMNVMFIFGNS PVLSCPVFMVFTLPYGVVRDVTKNGIMLDNTLIPLHGKVSEDLLGLSTEEQVIKLFNELKSNLKINASSGQCRMQMFNYV NGNGELFHTSFHNTALDRVTVNPVDGSRRYIMKIE >Mature_195_residues MHLTLLLLRNGMPVLLPEAACKYDKSLGVAYTMDPIMNEQLGIPTSDSPYSYLYRSNFTKFAVVSGANSEMNVMFIFGNS PVLSCPVFMVFTLPYGVVRDVTKNGIMLDNTLIPLHGKVSEDLLGLSTEEQVIKLFNELKSNLKINASSGQCRMQMFNYV NGNGELFHTSFHNTALDRVTVNPVDGSRRYIMKIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21787; Mature: 21787
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLTLLLLRNGMPVLLPEAACKYDKSLGVAYTMDPIMNEQLGIPTSDSPYSYLYRSNFTK CEEEEEEECCCCCEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCE FAVVSGANSEMNVMFIFGNSPVLSCPVFMVFTLPYGVVRDVTKNGIMLDNTLIPLHGKVS EEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCEEEECEEEECCCCCC EDLLGLSTEEQVIKLFNELKSNLKINASSGQCRMQMFNYVNGNGELFHTSFHNTALDRVT HHHHCCCCHHHHHHHHHHHHHCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCEECEEE VNPVDGSRRYIMKIE ECCCCCCCEEEEEEC >Mature Secondary Structure MHLTLLLLRNGMPVLLPEAACKYDKSLGVAYTMDPIMNEQLGIPTSDSPYSYLYRSNFTK CEEEEEEECCCCCEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCE FAVVSGANSEMNVMFIFGNSPVLSCPVFMVFTLPYGVVRDVTKNGIMLDNTLIPLHGKVS EEEEECCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCEEEECEEEECCCCCC EDLLGLSTEEQVIKLFNELKSNLKINASSGQCRMQMFNYVNGNGELFHTSFHNTALDRVT HHHHCCCCHHHHHHHHHHHHHCEEEECCCCCEEEEEEEEECCCCCEEEEECCCCEECEEE VNPVDGSRRYIMKIE ECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA