| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658184
Identifier: 88658184
GI number: 88658184
Start: 148656
End: 149978
Strand: Direct
Name: 88658184
Synonym: ECH_0158
Alternate gene names: NA
Gene position: 148656-149978 (Clockwise)
Preceding gene: 88658004
Following gene: 88658615
Centisome position: 12.64
GC content: 31.37
Gene sequence:
>1323_bases ATGATAGGTGGAAATACTCAAACTCCTAATGACTATGTTCCTATAAGAAGGCATCAACTTTCTCATAATAGTATAAAGTC GTTAACAAAGAAATTATTTTTGTTAAATACTAGTATAGGTATTGTGTCTGTAATTCATGCATCATTTTTAATAATGTTGT TTGATGCTATGTGTTTACAGAAAAAGCCTAAGCATACTATCTTAACATTAGCAGCTTTAATAGCTGTAATCTCTGTTGTA TCTCTGTTGTTATTCTATGTTAGATATACAGTCAGTAAGAAGAATAAAAGACATCTTGAATCAATGCATGCAAATGCTGA GTCTTTTGTATCTTTACTACAGGACCGTCAATTGTTGGATAATTTATCCCATAAAGTTCATCACTTACAACATTTAGCAC ATGAGTTGGAATCCATAGATGAGAAAGGTGTATTTATTGAGCATGCTTCTCAGAGAATATCTGCTTCTAGGGTTGATGTT GAGAAACAATTGCGAAATTTTGTTAAGCATTGTGAGGATGATATATCTAAAATGTATAGGGAATTAGAGGGTGTGACTGT TGATATGTCTGAAGTGAGTGGAATATTACTTAATCCTAGTTTTTTTAAAGAGAATGAAGCAGGGTTGATGTCTCTATCTG AAAGACGTAAGTTAATGAGTCAAAAAGAACATGAAATTAATCTCCTGATGAAGGGTTACTGTAGTGAAATATTAGCTAAA ATAGTATGTATTATTGAGATGATGAAGTTACATCAGTCTTCTTCTGTAGAAAATAAAAAGGTTTCTCTTTTTAGTGAAGA TGATAGTAAAGTGAAAGAATTAATCCGTATTTTGGTTAATACTAAATGTGTCTTAGAAGAATTGGATGGTGAAGAGATAA AATATCCTACATTTGAAATGTTATGTAATGTTATGTGGAATATAGGTTCTTTTTTATCAAGTATGCGATGTATGGCAAAG GAGAGTGTATATAAAAAAGCTGAAAATTTAATTCAAGAAAAAGGTAAACAAGTACAGAGATTTATTTCAGGTATATTATC TGCTGTTCGTAAACTTGATGTAGTAAAACAAGAACAAGGAAGCGAAGCAACTTCATCTGAACATACTATGTCAGAGGAGG ATTCTATTGTGGCTTTACGGTTAGTGCAATTGCAAAGTATAATTTTAAAATTGTTGTTTATTATGCAACGGAATAAATCA TATGACATTCATACAGAAACTTGCAGTGAAAATTCAAATGGGCCTATTGATAGTGAAGAGAATCCTGATTTTGCTGTCCA GAACTTGCAGAGTGTATCATGTTCTGGTATAATGTTAACATAA
Upstream 100 bases:
>100_bases TAATAATTAATAATTTTGATATAATAAATTAATATTTTTATTCTATTTAATAAAGTAAAAATATTATATTAATATTTATG GCACTAAATTGTAATTGTAT
Downstream 100 bases:
>100_bases TGTACTGTATTTTTGCTATTTTTTTCATTATCTAGAAATAATGTATTTTAATTTTTATTAATAATTGTGAAGTAATATGC TAATTGATCAAAAATTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQKKPKHTILTLAALIAVISVV SLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLDNLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDV EKQLRNFVKHCEDDISKMYRELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAK IVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEMLCNVMWNIGSFLSSMRCMAK ESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQGSEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKS YDIHTETCSENSNGPIDSEENPDFAVQNLQSVSCSGIMLT
Sequences:
>Translated_440_residues MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQKKPKHTILTLAALIAVISVV SLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLDNLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDV EKQLRNFVKHCEDDISKMYRELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAK IVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEMLCNVMWNIGSFLSSMRCMAK ESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQGSEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKS YDIHTETCSENSNGPIDSEENPDFAVQNLQSVSCSGIMLT >Mature_440_residues MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQKKPKHTILTLAALIAVISVV SLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLDNLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDV EKQLRNFVKHCEDDISKMYRELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAK IVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEMLCNVMWNIGSFLSSMRCMAK ESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQGSEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKS YDIHTETCSENSNGPIDSEENPDFAVQNLQSVSCSGIMLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49991; Mature: 49991
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQ CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KKPKHTILTLAALIAVISVVSLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH NLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDVEKQLRNFVKHCEDDISKMYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAK HHCCCEEEHHHCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEM HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LCNVMWNIGSFLSSMRCMAKESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKSYDIHTETCSENSNGPIDSEE CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NPDFAVQNLQSVSCSGIMLT CCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIGGNTQTPNDYVPIRRHQLSHNSIKSLTKKLFLLNTSIGIVSVIHASFLIMLFDAMCLQ CCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KKPKHTILTLAALIAVISVVSLLLFYVRYTVSKKNKRHLESMHANAESFVSLLQDRQLLD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH NLSHKVHHLQHLAHELESIDEKGVFIEHASQRISASRVDVEKQLRNFVKHCEDDISKMYR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEGVTVDMSEVSGILLNPSFFKENEAGLMSLSERRKLMSQKEHEINLLMKGYCSEILAK HHCCCEEEHHHCCCEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVCIIEMMKLHQSSSVENKKVSLFSEDDSKVKELIRILVNTKCVLEELDGEEIKYPTFEM HHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH LCNVMWNIGSFLSSMRCMAKESVYKKAENLIQEKGKQVQRFISGILSAVRKLDVVKQEQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEATSSEHTMSEEDSIVALRLVQLQSIILKLLFIMQRNKSYDIHTETCSENSNGPIDSEE CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NPDFAVQNLQSVSCSGIMLT CCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA