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The map label for this gene is yfkH [H]

Identifier: 88658113

GI number: 88658113

Start: 531104

End: 531928

Strand: Direct

Name: yfkH [H]

Synonym: ECH_0529

Alternate gene names: 88658113

Gene position: 531104-531928 (Clockwise)

Preceding gene: 88658140

Following gene: 88658443

Centisome position: 45.15

GC content: 26.42

Gene sequence:

>825_bases
ATGTTAAAAGAAAAAATAAAATGTCTTTTGAAATGTATATATTATGCAATGGTTGATATGATCAGACATGATGGGATAGA
ACATGCAGGTTATTTGTCATTTATTATATTATTATCAATCTTTCCTTTTTTAGTATTTTTTATGGCATTAGTGTCGAACG
TAGCTCAGTTATTAAACCACTATGATATTAGTATTAATGATAAATTGATTATATTAATCAATGATAATATCCCTCATGAA
GTTATTTCAGGACTTATGCCACGGATTCAAGAAATAATTTCAGGACCTCCTCATAGCTTATTAACATTAGCAGTTATAGG
GACAATATGGACTGCTTCATCTGCTGTAGAAGGAATAAGGACTATATTAAATAAAGCATGTAGAGTTTCTAGTCCACCTT
CTTATATTTTTCGTAGATTGTTAAGTATTTTTCAATTTCTTGTGATCACTTTGACAATAATTATTGCTATGGTATGTATA
ATTTTACTTCCTGTGATTTATGAAATGTTAAATAAGGATTTAGGATATTTAAAATATACTGTGAGTGAATTGGTATTGTT
TATATCTATTACTTTATTGTATTTTATTGTACCAAATATTAAACAAAGTTTAATGGATGTAATACCAGGTGCAATATTAG
TTACTTTATTATGGACATGTTCATCCTTTGTTTTTACTTGGTATATAAAAACTTTTCACCAATTGAATATAATATATGGG
AGTTTAGCCAGCATTATAGCATCATTGTTGTTTTTCTATATTTTAAGTATATTTTTTATATATGGAGCTGAACTCAACTA
CAGATTAAAAAACATGTTTATTTAA

Upstream 100 bases:

>100_bases
AGTTGTAGTATTAATATTTAATGTTTTAGTTTTGAAGAGATGAAATTTATATTTTAATTTTTAGTAATTCAGTAATTATT
TATTAAAAGGCAATGAAAAT

Downstream 100 bases:

>100_bases
CATTGAATTATTTAGGAAAAGAATTTGTGTGTACGACACTATATAAATATAATGTCGTACTAGAAAAATATATGCTATAA
GATACTTGATGTAAGTTAAG

Product: YihY family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHYDISINDKLIILINDNIPHE
VISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCI
ILLPVIYEMLNKDLGYLKYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKTFHQLNIIYG
SLASIIASLLFFYILSIFFIYGAELNYRLKNMFI

Sequences:

>Translated_274_residues
MLKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHYDISINDKLIILINDNIPHE
VISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCI
ILLPVIYEMLNKDLGYLKYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKTFHQLNIIYG
SLASIIASLLFFYILSIFFIYGAELNYRLKNMFI
>Mature_274_residues
MLKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHYDISINDKLIILINDNIPHE
VISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCI
ILLPVIYEMLNKDLGYLKYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKTFHQLNIIYG
SLASIIASLLFFYILSIFFIYGAELNYRLKNMFI

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31279; Mature: 31279

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNH
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDISINDKLIILINDNIPHEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIR
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCIILLPVIYEMLNKDLGYLKYT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKTFHQLNIIYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLASIIASLLFFYILSIFFIYGAELNYRLKNMFI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure
MLKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNH
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDISINDKLIILINDNIPHEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIR
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
TILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCIILLPVIYEMLNKDLGYLKYT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKTFHQLNIIYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLASIIASLLFFYILSIFFIYGAELNYRLKNMFI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]