| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88658067
Identifier: 88658067
GI number: 88658067
Start: 1127093
End: 1128706
Strand: Reverse
Name: 88658067
Synonym: ECH_1104
Alternate gene names: NA
Gene position: 1128706-1127093 (Counterclockwise)
Preceding gene: 88658255
Following gene: 88658460
Centisome position: 95.96
GC content: 35.32
Gene sequence:
>1614_bases ATGCAAAATAGTCAAGATTACCATGCGTATGATAAACTTTTTAAAGAGCTAAAACGTGTTGTTTTTCATATTCCAGGTGT TGGTATTGTTCGTGTAGGACAATTAGTGCGTAATGTTACACCAGCATCTGTTATGGTTGGACCTCAGGGTGATGATATAG ATGGAAACTTTTTAAGCAGAGTATTTGTGCATCGTTCTAAGAAAGAAGGTGATGTACAAGAACTTGCGGATTTTGTCAGA GGATTAGGATTTGTACCAGTAGTATGTGCTGATTATCCAATATTAGACAGTGAAGACACTCCTGTTTATAGTCTAACCAA ACAGTATAGTCATAGGACTGTATTGATTGTTTCTTCTCGTGATGGGTATACATCACGTGATATATGTAGTATTGTAAAAA GAAACAAAAAGAATTTTGCTGACAGTAGTGCTGGTGGTAAACCTCCACGCGAAATTCATATAGCTACATATGATCCAAAC AGTAAACCATTAAAACAGAAACTATATGATGCAGTGTTGTATGCTGAACGATGGTCTTTACTTACAACTCAAGAGAAAGT GATAAGATGTGTTGCGAGTGTATTGTCTCTTGCTCTTCCTTTGCTTCCTCCACTTCTTTTATTATCTTATATTGGGAATT TGGAGCTTAGAGAACAAGCATATAATATGAATTTATTGCCATGGCAATGTCGGTTATATGCAAATGCATCAGAGGGTGTT TATGATGTTATGGTTAATGGAACTGATAAAGCAAGAGAAAAAGCAGTGCAATCATACATCATAGAAGAAGCGAAAAAAAG GGGATTTGTTAAAGAACATGAAGGAGAGGGTGATCAACCTACTGATTTGGGAAAAGCAGTAAGTGAAAAACATAATCTAC TCCTTGTAGCTAGTAATGAAGAACTTACAAAAAGACAATTATGGACAAGAATTACAACGTTTTTGGTATTAGCGTTTGTA TGTCTTGCACACATGGTAGCATTGGCATGTCATCTTCTGAAATGTGATAAAGCGGCTTTGTATTGTTCGATGCTATCATA TCTTGTGATATTTGCAGAAGGAATATACTTACTTTCTTTAAAAACTACAACCTCAAAAATTTGTGCTGCTGTTTGTATGA TGTTTGCAGTGTTTATGTTAACGATAAGTGCATTTTTCTTGTATACAGGATGTATTATGGATGGGTATGTCCCTATAGTA TCTAGCGTGATGGTTATGATGACAGCTGTTGTGTTATGTGTTACTTTATTATGTAATCAATACTATAAGCAAGATAGAGA GTTAGTAGCAAAGTTAGGTGGCCTTAGTACTACGGCTTGTGTGTCTATGAAGAAGCAAATTTCTGCGCTTGATGATGTTA AACATGTTAATGTTGAAGGAAATAGTTATCAGTTTCTTGATAAATTTAAGTTTGCACTTTTTAATGCATATAAAGCGGGG TTATTTGGTGTATTGCCACAACATGAACCTCAAAATGATTGTAGGCAAGAAAATGAAGGATCACCTAGTGTTGATATAGA AGCACGTGATTTAGAAAATGTTAGTACTAGAACAAGTGTACAAGTTGATGACAGTGTTGTTGAAGGTGTAGGTGTTGAGC GAGGTAAAACATAG
Upstream 100 bases:
>100_bases CTTTACCAGAAATAAAATCCTTACTTCTATGCTTAAATAATTAATGTATTTGCAGGAATTATATCGTATCCTTATAGTAG ATAGTTTTTTTTCAATACTT
Downstream 100 bases:
>100_bases TATTTACACAAAGAGTTATTTTTGTGAAATGATAGTTATCAAGATTTATGTATATTATTCTTGATTTTTCGATGAGTTCT TTATCAAGCAATAGCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MQNSQDYHAYDKLFKELKRVVFHIPGVGIVRVGQLVRNVTPASVMVGPQGDDIDGNFLSRVFVHRSKKEGDVQELADFVR GLGFVPVVCADYPILDSEDTPVYSLTKQYSHRTVLIVSSRDGYTSRDICSIVKRNKKNFADSSAGGKPPREIHIATYDPN SKPLKQKLYDAVLYAERWSLLTTQEKVIRCVASVLSLALPLLPPLLLLSYIGNLELREQAYNMNLLPWQCRLYANASEGV YDVMVNGTDKAREKAVQSYIIEEAKKRGFVKEHEGEGDQPTDLGKAVSEKHNLLLVASNEELTKRQLWTRITTFLVLAFV CLAHMVALACHLLKCDKAALYCSMLSYLVIFAEGIYLLSLKTTTSKICAAVCMMFAVFMLTISAFFLYTGCIMDGYVPIV SSVMVMMTAVVLCVTLLCNQYYKQDRELVAKLGGLSTTACVSMKKQISALDDVKHVNVEGNSYQFLDKFKFALFNAYKAG LFGVLPQHEPQNDCRQENEGSPSVDIEARDLENVSTRTSVQVDDSVVEGVGVERGKT
Sequences:
>Translated_537_residues MQNSQDYHAYDKLFKELKRVVFHIPGVGIVRVGQLVRNVTPASVMVGPQGDDIDGNFLSRVFVHRSKKEGDVQELADFVR GLGFVPVVCADYPILDSEDTPVYSLTKQYSHRTVLIVSSRDGYTSRDICSIVKRNKKNFADSSAGGKPPREIHIATYDPN SKPLKQKLYDAVLYAERWSLLTTQEKVIRCVASVLSLALPLLPPLLLLSYIGNLELREQAYNMNLLPWQCRLYANASEGV YDVMVNGTDKAREKAVQSYIIEEAKKRGFVKEHEGEGDQPTDLGKAVSEKHNLLLVASNEELTKRQLWTRITTFLVLAFV CLAHMVALACHLLKCDKAALYCSMLSYLVIFAEGIYLLSLKTTTSKICAAVCMMFAVFMLTISAFFLYTGCIMDGYVPIV SSVMVMMTAVVLCVTLLCNQYYKQDRELVAKLGGLSTTACVSMKKQISALDDVKHVNVEGNSYQFLDKFKFALFNAYKAG LFGVLPQHEPQNDCRQENEGSPSVDIEARDLENVSTRTSVQVDDSVVEGVGVERGKT >Mature_537_residues MQNSQDYHAYDKLFKELKRVVFHIPGVGIVRVGQLVRNVTPASVMVGPQGDDIDGNFLSRVFVHRSKKEGDVQELADFVR GLGFVPVVCADYPILDSEDTPVYSLTKQYSHRTVLIVSSRDGYTSRDICSIVKRNKKNFADSSAGGKPPREIHIATYDPN SKPLKQKLYDAVLYAERWSLLTTQEKVIRCVASVLSLALPLLPPLLLLSYIGNLELREQAYNMNLLPWQCRLYANASEGV YDVMVNGTDKAREKAVQSYIIEEAKKRGFVKEHEGEGDQPTDLGKAVSEKHNLLLVASNEELTKRQLWTRITTFLVLAFV CLAHMVALACHLLKCDKAALYCSMLSYLVIFAEGIYLLSLKTTTSKICAAVCMMFAVFMLTISAFFLYTGCIMDGYVPIV SSVMVMMTAVVLCVTLLCNQYYKQDRELVAKLGGLSTTACVSMKKQISALDDVKHVNVEGNSYQFLDKFKFALFNAYKAG LFGVLPQHEPQNDCRQENEGSPSVDIEARDLENVSTRTSVQVDDSVVEGVGVERGKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59852; Mature: 59852
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNSQDYHAYDKLFKELKRVVFHIPGVGIVRVGQLVRNVTPASVMVGPQGDDIDGNFLSR CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHH VFVHRSKKEGDVQELADFVRGLGFVPVVCADYPILDSEDTPVYSLTKQYSHRTVLIVSSR HHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECC DGYTSRDICSIVKRNKKNFADSSAGGKPPREIHIATYDPNSKPLKQKLYDAVLYAERWSL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH LTTQEKVIRCVASVLSLALPLLPPLLLLSYIGNLELREQAYNMNLLPWQCRLYANASEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCE YDVMVNGTDKAREKAVQSYIIEEAKKRGFVKEHEGEGDQPTDLGKAVSEKHNLLLVASNE EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCC ELTKRQLWTRITTFLVLAFVCLAHMVALACHLLKCDKAALYCSMLSYLVIFAEGIYLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE KTTTSKICAAVCMMFAVFMLTISAFFLYTGCIMDGYVPIVSSVMVMMTAVVLCVTLLCNQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YYKQDRELVAKLGGLSTTACVSMKKQISALDDVKHVNVEGNSYQFLDKFKFALFNAYKAG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHH LFGVLPQHEPQNDCRQENEGSPSVDIEARDLENVSTRTSVQVDDSVVEGVGVERGKT HHCCCCCCCCCHHHHHCCCCCCCCEEEHHHHCCCCCCCEEEECHHHHHCCCCCCCCC >Mature Secondary Structure MQNSQDYHAYDKLFKELKRVVFHIPGVGIVRVGQLVRNVTPASVMVGPQGDDIDGNFLSR CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHH VFVHRSKKEGDVQELADFVRGLGFVPVVCADYPILDSEDTPVYSLTKQYSHRTVLIVSSR HHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEECC DGYTSRDICSIVKRNKKNFADSSAGGKPPREIHIATYDPNSKPLKQKLYDAVLYAERWSL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH LTTQEKVIRCVASVLSLALPLLPPLLLLSYIGNLELREQAYNMNLLPWQCRLYANASEGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCE YDVMVNGTDKAREKAVQSYIIEEAKKRGFVKEHEGEGDQPTDLGKAVSEKHNLLLVASNE EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCC ELTKRQLWTRITTFLVLAFVCLAHMVALACHLLKCDKAALYCSMLSYLVIFAEGIYLLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE KTTTSKICAAVCMMFAVFMLTISAFFLYTGCIMDGYVPIVSSVMVMMTAVVLCVTLLCNQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YYKQDRELVAKLGGLSTTACVSMKKQISALDDVKHVNVEGNSYQFLDKFKFALFNAYKAG HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHH LFGVLPQHEPQNDCRQENEGSPSVDIEARDLENVSTRTSVQVDDSVVEGVGVERGKT HHCCCCCCCCCHHHHHCCCCCCCCEEEHHHHCCCCCCCEEEECHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA