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The map label for this gene is petA [H]

Identifier: 88658045

GI number: 88658045

Start: 519817

End: 520380

Strand: Direct

Name: petA [H]

Synonym: ECH_0520

Alternate gene names: 88658045

Gene position: 519817-520380 (Clockwise)

Preceding gene: 88658527

Following gene: 88658641

Centisome position: 44.19

GC content: 35.11

Gene sequence:

>564_bases
ATGAATAATGATGAGGATAAATACTCTGTATTTAAGACAAAAGTTAAAAGACGAGATTTTTTAGGCTTGACTACTTTATC
TATGGCAGGTATTGGGTTGTTTTCATCAGTATATCCCTTGATAAAATTTTTAAGTCCATCTGCAGAAGTTATAGCACAGT
CTACTGTTGAAGTAAATTTATCAGATATTAAAGAAGGGAAAACTAAAGTTATAAAGTGGCAAGGTAAGCCTGTCTTTATA
CGTAAACGTACTACACAAGAGATAGAAGAAGCCAGAGCTGTAAAAATAGATAGTTTGCGGGATCCACAGTCTGATCAAGA
GCGTACTCATCAAGGAAGGGAAGAATGGTTAATAATGGTAGGTATTTGTACACATTTAGGATGTGTTCCAGTTGAAGTAG
ATGATGGAAAGAAAGGTTGGTATTGTCCTTGTCATGGTTCTAAATATGATACGTCTGGAAGAATTATTAGTGGGCCTGCA
CCACTTAATCTTCCTGTTCCTGATTACTATTTTTCTCAAAAAGACGTTATTGTTATAGGAGTGAAGGGAACTGATGTTGC
ATAA

Upstream 100 bases:

>100_bases
AATTAATAAAATGTACTTGTATAACCTGATATTGCTTTTATAATGTAGCCTAGTGTTATGCATTTTAGTATTATCTATGT
TGTAATGTTGAAGGGTAATT

Downstream 100 bases:

>100_bases
ATATAAGGTAAGAGGTATTAGTTAATGTCTGAACATGACAATATAAAAAAAACGGAAGGGCGTGGCATTAGGGCTTGGAT
AGAATATAGAATGCCGATTG

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNNDEDKYSVFKTKVKRRDFLGLTTLSMAGIGLFSSVYPLIKFLSPSAEVIAQSTVEVNLSDIKEGKTKVIKWQGKPVFI
RKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMVGICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRIISGPA
PLNLPVPDYYFSQKDVIVIGVKGTDVA

Sequences:

>Translated_187_residues
MNNDEDKYSVFKTKVKRRDFLGLTTLSMAGIGLFSSVYPLIKFLSPSAEVIAQSTVEVNLSDIKEGKTKVIKWQGKPVFI
RKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMVGICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRIISGPA
PLNLPVPDYYFSQKDVIVIGVKGTDVA
>Mature_187_residues
MNNDEDKYSVFKTKVKRRDFLGLTTLSMAGIGLFSSVYPLIKFLSPSAEVIAQSTVEVNLSDIKEGKTKVIKWQGKPVFI
RKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMVGICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRIISGPA
PLNLPVPDYYFSQKDVIVIGVKGTDVA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=159, Percent_Identity=49.0566037735849, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17540418, Length=144, Percent_Identity=50, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320811, Length=180, Percent_Identity=49.4444444444444, Blast_Score=173, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24580896, Length=144, Percent_Identity=52.0833333333333, Blast_Score=164, Evalue=2e-41,
Organism=Drosophila melanogaster, GI17864350, Length=109, Percent_Identity=40.3669724770642, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 20893; Mature: 20893

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDEDKYSVFKTKVKRRDFLGLTTLSMAGIGLFSSVYPLIKFLSPSAEVIAQSTVEVNL
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHEEEEH
SDIKEGKTKVIKWQGKPVFIRKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMV
HHHCCCCEEEEEECCCEEEEECCCHHHHHHHHCEEECCCCCCCCHHHHHHCCHHHEEEEE
GICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRIISGPAPLNLPVPDYYFSQKDVIVIG
EEHHHCCEEEEEECCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEEEE
VKGTDVA
ECCCCCC
>Mature Secondary Structure
MNNDEDKYSVFKTKVKRRDFLGLTTLSMAGIGLFSSVYPLIKFLSPSAEVIAQSTVEVNL
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEHHHEEEEH
SDIKEGKTKVIKWQGKPVFIRKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMV
HHHCCCCEEEEEECCCEEEEECCCHHHHHHHHCEEECCCCCCCCHHHHHHCCHHHEEEEE
GICTHLGCVPVEVDDGKKGWYCPCHGSKYDTSGRIISGPAPLNLPVPDYYFSQKDVIVIG
EEHHHCCEEEEEECCCCCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCEECCCCEEEEE
VKGTDVA
ECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA