| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657999
Identifier: 88657999
GI number: 88657999
Start: 856700
End: 857917
Strand: Reverse
Name: 88657999
Synonym: ECH_0838
Alternate gene names: NA
Gene position: 857917-856700 (Counterclockwise)
Preceding gene: 88658624
Following gene: 88658556
Centisome position: 72.94
GC content: 27.91
Gene sequence:
>1218_bases ATGTGTTTTTATCCTATTTTAAATTGGATTATAGGGGTATTAGTACTTATTTGTGGGAGTAATTTTCAAATAGCTTATGC TATAGTAAATTCATATGTAGGTGAAGATTTAAATTTAAATGTTGCACAAACTGCATTAGCGGCATCAATTCATATGTGGT GTTTTTCCATTTTTCAGCTATTTACTGGTTCAATATTAGATTGTTATAATGAAAAAAAAGTACTATCAATATCTGTTATA TTAACATCTATAGGAACTTTTTTATTTGCTCATGCTGATTATACTATTTGTTTTTTTGTATCGCAGATTTTTTTAGCATT AGGGGCATCTTTTGGCTTTGTAGGTGCAGGTTATATTAGTTATAAGTTTTTTTCCCCTTTAAAGTCAGGGATTATGTTTG GACTAGTTCAAACAGTGTATAGTTTATCTTCTTTATTAATGGAATATATCTATACATATTTGACTTTGTCAGGGTTATCT TGGAGAGATATCATTAGGTATATAGAATATGCTGAAATTATTATACTCATTTTTACGTTGTTTCTAAAAAATAGTACGAA GTCAACATATCTAGTAAAAAGTGGGAATACAAATATCATAAAATTATTATTACAAGTGTTTAAACATATTGTTGAAATAC TACAGGTAAGAAACATATGGTTATTTACGGTAGTTGGTAGTTCTATGTTTGGAGTTTTCTTATCAATAGCTATATTGTGG GGACAAAAATTATTAATGGCTATGAATTTGAGTGGCTATTATGCTGGTGTTATACATTCTGTTATATGGATAGGTTTTGC TATAGGTTGTCCTTTAGTAAATGCAATTTCTAATATATTGGAAAATAGAAAACATGTGCTTATGGGTTTTTGTTTGTTAC AATGTATTAGTCTTAGTTTGTTATTATATAGTAGTAATTTATACTTTTTGTGTTTTTTAGTATTTATATTTGGATGTGCA TCTGGTGGACATATGTTGAATTTTTCTATTGGTACAGATGTTGTGGATAAAGATAAAGTAGGGACTGTTTGTTCACTTAT TAATGGACTGATGTGTATTGTAGGTGGTGTCATTATGTTTTTAATTGGACTTGCTTTGGAATATCAAAATAAATATGATA TAATACACATAAGCTTTTTTATGCCAGTGCTTATTTTTCTATCGTTTATTTTGTTATTTTTTTGTCGTGATACTTTCTGT AGGATTAGGGTTTTGTAA
Upstream 100 bases:
>100_bases TTTAACTTGGTTAATATTATAATTACTACGCTAAAAGTTATGTTTGGATTTATAAGTAGTTCTAGAAAATTTTTGTTAAT AATTTATGAAGATAATGTAA
Downstream 100 bases:
>100_bases TTTTTCTGAGGTATTTTTTTAGTATATAATGCGTTAGAATATTGATAAACTATTTGTATATGTTGATATAAATGCATATA TAACTTTCCAGATTTGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Protein; Facilitator Superfamily Transporter; Facilitator Membrane Proteins
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MCFYPILNWIIGVLVLICGSNFQIAYAIVNSYVGEDLNLNVAQTALAASIHMWCFSIFQLFTGSILDCYNEKKVLSISVI LTSIGTFLFAHADYTICFFVSQIFLALGASFGFVGAGYISYKFFSPLKSGIMFGLVQTVYSLSSLLMEYIYTYLTLSGLS WRDIIRYIEYAEIIILIFTLFLKNSTKSTYLVKSGNTNIIKLLLQVFKHIVEILQVRNIWLFTVVGSSMFGVFLSIAILW GQKLLMAMNLSGYYAGVIHSVIWIGFAIGCPLVNAISNILENRKHVLMGFCLLQCISLSLLLYSSNLYFLCFLVFIFGCA SGGHMLNFSIGTDVVDKDKVGTVCSLINGLMCIVGGVIMFLIGLALEYQNKYDIIHISFFMPVLIFLSFILLFFCRDTFC RIRVL
Sequences:
>Translated_405_residues MCFYPILNWIIGVLVLICGSNFQIAYAIVNSYVGEDLNLNVAQTALAASIHMWCFSIFQLFTGSILDCYNEKKVLSISVI LTSIGTFLFAHADYTICFFVSQIFLALGASFGFVGAGYISYKFFSPLKSGIMFGLVQTVYSLSSLLMEYIYTYLTLSGLS WRDIIRYIEYAEIIILIFTLFLKNSTKSTYLVKSGNTNIIKLLLQVFKHIVEILQVRNIWLFTVVGSSMFGVFLSIAILW GQKLLMAMNLSGYYAGVIHSVIWIGFAIGCPLVNAISNILENRKHVLMGFCLLQCISLSLLLYSSNLYFLCFLVFIFGCA SGGHMLNFSIGTDVVDKDKVGTVCSLINGLMCIVGGVIMFLIGLALEYQNKYDIIHISFFMPVLIFLSFILLFFCRDTFC RIRVL >Mature_405_residues MCFYPILNWIIGVLVLICGSNFQIAYAIVNSYVGEDLNLNVAQTALAASIHMWCFSIFQLFTGSILDCYNEKKVLSISVI LTSIGTFLFAHADYTICFFVSQIFLALGASFGFVGAGYISYKFFSPLKSGIMFGLVQTVYSLSSLLMEYIYTYLTLSGLS WRDIIRYIEYAEIIILIFTLFLKNSTKSTYLVKSGNTNIIKLLLQVFKHIVEILQVRNIWLFTVVGSSMFGVFLSIAILW GQKLLMAMNLSGYYAGVIHSVIWIGFAIGCPLVNAISNILENRKHVLMGFCLLQCISLSLLLYSSNLYFLCFLVFIFGCA SGGHMLNFSIGTDVVDKDKVGTVCSLINGLMCIVGGVIMFLIGLALEYQNKYDIIHISFFMPVLIFLSFILLFFCRDTFC RIRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45465; Mature: 45465
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCFYPILNWIIGVLVLICGSNFQIAYAIVNSYVGEDLNLNVAQTALAASIHMWCFSIFQL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FTGSILDCYNEKKVLSISVILTSIGTFLFAHADYTICFFVSQIFLALGASFGFVGAGYIS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCHHHH YKFFSPLKSGIMFGLVQTVYSLSSLLMEYIYTYLTLSGLSWRDIIRYIEYAEIIILIFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FLKNSTKSTYLVKSGNTNIIKLLLQVFKHIVEILQVRNIWLFTVVGSSMFGVFLSIAILW HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQKLLMAMNLSGYYAGVIHSVIWIGFAIGCPLVNAISNILENRKHVLMGFCLLQCISLSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYSSNLYFLCFLVFIFGCASGGHMLNFSIGTDVVDKDKVGTVCSLINGLMCIVGGVIMF HHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LIGLALEYQNKYDIIHISFFMPVLIFLSFILLFFCRDTFCRIRVL HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHEEECC >Mature Secondary Structure MCFYPILNWIIGVLVLICGSNFQIAYAIVNSYVGEDLNLNVAQTALAASIHMWCFSIFQL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FTGSILDCYNEKKVLSISVILTSIGTFLFAHADYTICFFVSQIFLALGASFGFVGAGYIS HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCHHHH YKFFSPLKSGIMFGLVQTVYSLSSLLMEYIYTYLTLSGLSWRDIIRYIEYAEIIILIFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH FLKNSTKSTYLVKSGNTNIIKLLLQVFKHIVEILQVRNIWLFTVVGSSMFGVFLSIAILW HHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQKLLMAMNLSGYYAGVIHSVIWIGFAIGCPLVNAISNILENRKHVLMGFCLLQCISLSL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYSSNLYFLCFLVFIFGCASGGHMLNFSIGTDVVDKDKVGTVCSLINGLMCIVGGVIMF HHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LIGLALEYQNKYDIIHISFFMPVLIFLSFILLFFCRDTFCRIRVL HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA