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The map label for this gene is atpF

Identifier: 88657968

GI number: 88657968

Start: 1115044

End: 1115529

Strand: Direct

Name: atpF

Synonym: ECH_1089

Alternate gene names: NA

Gene position: 1115044-1115529 (Clockwise)

Preceding gene: 88657774

Following gene: 88657904

Centisome position: 94.8

GC content: 32.51

Gene sequence:

>486_bases
ATGATATCCACATATTTTATTACCAACATTGCATTTTGCATCGGAGCCTTGTCAGCTTTTTGGCCATTATATAGGAAAAT
CAATCAGCTTTTATCTTCAATGTCAAACAAGGTGAGAAGGGAGGTTATGTTACCTTATGATATCCAAAAACAATCTAAAG
ATTTATTGGATAGTGCATTAATTCAAAATTATGAAATTGAAAAAACCATAGCCGAAGTTCTAAAGACAGCAAATGAAGAA
TACAAACTTATTATTGCATCCAACAAAAAAGATATTGAGAATATTATAGAAAAACATCTTGATGCAGCTGTACAAAGAAT
ATCTGATCAAGCATCAGCAATGGTTCAATCACTAAAGCTAAATACCGTCGATATTGCAGCCAGTGCCGTTCAAGAGTTAA
TCAAAGAATACAATGAGCATCAAAAACAGGATAATGGTGGTGTTATTTCTACAATAGATCGCGACCTTAGAAAAAAATTA
CACTGA

Upstream 100 bases:

>100_bases
AAATAGCTTCAATGTACTACAATAAAATGCTAGGTACTGCTGAATATGTTGATAAAGATAAGTTACGCGATATAACTACT
AGATTATACAAGGAGAAAAT

Downstream 100 bases:

>100_bases
ATTTTCAACTTTTACTGACACGAGTTTTAAAATTTTTTGTAGTATGCTACCTTTTTTAGTCATGGTCTTCTTTTTACCAT
ATACTCTATTGACAACCAAT

Product: ATP synthase F0, B chain

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MISTYFITNIAFCIGALSAFWPLYRKINQLLSSMSNKVRREVMLPYDIQKQSKDLLDSALIQNYEIEKTIAEVLKTANEE
YKLIIASNKKDIENIIEKHLDAAVQRISDQASAMVQSLKLNTVDIAASAVQELIKEYNEHQKQDNGGVISTIDRDLRKKL
H

Sequences:

>Translated_161_residues
MISTYFITNIAFCIGALSAFWPLYRKINQLLSSMSNKVRREVMLPYDIQKQSKDLLDSALIQNYEIEKTIAEVLKTANEE
YKLIIASNKKDIENIIEKHLDAAVQRISDQASAMVQSLKLNTVDIAASAVQELIKEYNEHQKQDNGGVISTIDRDLRKKL
H
>Mature_161_residues
MISTYFITNIAFCIGALSAFWPLYRKINQLLSSMSNKVRREVMLPYDIQKQSKDLLDSALIQNYEIEKTIAEVLKTANEE
YKLIIASNKKDIENIIEKHLDAAVQRISDQASAMVQSLKLNTVDIAASAVQELIKEYNEHQKQDNGGVISTIDRDLRKKL
H

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18370; Mature: 18370

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTYFITNIAFCIGALSAFWPLYRKINQLLSSMSNKVRREVMLPYDIQKQSKDLLDSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IQNYEIEKTIAEVLKTANEEYKLIIASNKKDIENIIEKHLDAAVQRISDQASAMVQSLKL
HHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTVDIAASAVQELIKEYNEHQKQDNGGVISTIDRDLRKKLH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MISTYFITNIAFCIGALSAFWPLYRKINQLLSSMSNKVRREVMLPYDIQKQSKDLLDSAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IQNYEIEKTIAEVLKTANEEYKLIIASNKKDIENIIEKHLDAAVQRISDQASAMVQSLKL
HHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NTVDIAASAVQELIKEYNEHQKQDNGGVISTIDRDLRKKLH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA