| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657907
Identifier: 88657907
GI number: 88657907
Start: 98685
End: 101066
Strand: Direct
Name: 88657907
Synonym: ECH_0113
Alternate gene names: NA
Gene position: 98685-101066 (Clockwise)
Preceding gene: 88658149
Following gene: 88657795
Centisome position: 8.39
GC content: 34.42
Gene sequence:
>2382_bases GTGAGGACGGGGATAGTAGTTGGTGTAAATGAGCAGGATATTGCTGGTGAAGAGCAGGAGATGCCGTTGTCACAGCAATT CCCTAATTTGCATCCTGAATCTTGTCAAGATATTATAAAGGCAGAAGATCGTAGAGTGGGTGTTGTTACTAAAAAAAAGA AGAGGAAATCTAGTCCTGTATCAAAGGATATGATAAGATCATCGGATCAACTTTCAACAGGAACTTTAAAAGAATCTGAT GAGTACGGTAAAAAAAGGAAATCAAAAAATAGAAAAACAGGTAGTCCGTTAAAACAAGTAAAGACGGTAATAGTAGTTGG TACAAATAAGCAGGATATTGCTAGTGAGGAGCAGGAGATGCCATTGTCACAGCAACTCTCTGATTTGCATCCTGAATCTT GTGATCAAGATATTGTAAAGGCAGAAGATCGTAGAGTATGTGTTGCTACTAAAGAGAAGAGGAGGAAATCTAGTCCTATA TCAAAGGATATGATAGGATCATCGGATCAACTTTCAATAGGAACTTTAAAAGAATCTGATGAGTACGGTAAAAAAAGGAA ATCAAAAAATAGAAAAACAGGTAGTCCGTTAAAACAAGTGAAGACGGGAATAGTAGCTAGTGCAAATGAGCAGGATATTG CTGGTGAAGGGCAGGGAATACCGTTATCACATCAACTCCTGCACTTTGAATCTTGTGATCAAAATATTGTAAAGGTAGAA GATCGGAAAGTACATGTTGTTACTAGAGAAGAAAGAAAATCTAATCCAGTATTAGAAGATAATGAATATTTAAAACAGGA TGCAAAGTCAAAAGTTCATGCAGGACAAGCTGTTGGACAACCAATGAGTTGTGCTGAAAAGGCTAAAGCTAAGGTATCTT CTGTTGAAGAGACTGTAGGAAAAGTATGTACTGATCAGAAAGTTAAAGAAGTCTCTGAATGTAAAAATGATGTTTATGAT ACTAGCGTACAACATACTGCAGTAAGTTATGTTGAAAAGGTTAAGGTTGGTTTATCTGATGATCTAGGAAAGACACTTCT TCCTATAGATTTGAAAAGAACTGTGAGTCAACAAGATTTGAATAGTGAATATTTAAAACAAAGTGCAAAGTCAAAAGTTC ATGCAGGACAAGCTGTTGGACAACCAATGAGTTATGCTGAAAAGGCTAAGGTATCTTCTGTTAAAGAAGCTGTGGGAAAA GCATGCACTGGCCAGAAAGTTAAAGGAGCCTCTGGATTTAAAAATGATGTTGATGAAACATTGAGTGCTAGTATGCAACA TACTGCAGTACCTGGAATGGTAACTCCAACAAATATTATTCCTGCTAGGCATATTGTAAGTGGAGTAGCTGTTTTCAAAC ATTTGCAGGGTTATTCGTTAGAAGAATACCAATCTTTAGTGGAAAATTTTAGGAAATCTGTAGCGTGCTTTTCAAAGATG CATATGTCCTATGCGTATCAAATATTGCATAATACATTCATTGTACACAATGGACAGATTGTGTTGAAACCTGAAATTGA ACAGTTTCTATTGAAAACAACCAGTAATATAAAACTGTGTACCTTTATAATTAAAATAGGAATAGTAGACCAAGTTATGG CTAGGCTTGGCAATTCTTATGGTTGTAATAGCATAAAATATTGTGCAAGCTATTACCATGATTCAGAAATTATAGATGAA ATTCTTATTAGGTTTTATGGTACATCATATTCTAGTTTTTCAGAGGTGTCACAACAAGTACGTCATGATACAGTTGATTG TCTTAAGAAACGTAATGTGACAAATGTTTTTAAGCTACATGATAGTAGCTTTTATTCAGAAGTATTAAGTGTGTGTTGTA ACTTTATGGGTGTAAGTAATAAAGACATAGAATTGCACAAACTATGTAGTTTTGTTCAGTTATCTTGTTGTATACAAATT GCGCAAATGTATCACATGATGCTAAAGGTAAAATATTCTGCTGGAGACAAGCAAGATTATGCACAACAATGTATATCTGA AAGACTTGCAAAAGGACCTGCAATAAAGGATTTTATGTATCGTGCTTTACTTTTTGGTAGATGTGCTTGTAATGTAAGGA ACACATTTAGGCATTTATATAGTCCAGATGATAAAAATCATATACGTACAGTATCTGGGTTAAACGTTCCGTATTGTATG ATTCGAGTAAGTAGTAAGGGAATTATTCCAAAAATTGAGAGTTATATTAAGAGAAATAAAATGGATTTTGGTGTTTTTGT TGATGATATAGTAAATTTTGTCAGAGATGCATTGTATCGTCCAGGTGAAAGAACTTGTATCAAAGAAGACATAAAAACAT ATCACACTATAGTAAGTAGTCGATATGACAATATGATAAGTAATTGTAGCGTTTCCAGATGA
Upstream 100 bases:
>100_bases GTTGATGAATAATGGTGAAAAGAGAAAGTTATCGAAATCATCTGGTAAATACAATAAGCAGAGAGAATTAAGAAGTAGAA AGACATATCAGTTAAAGCAA
Downstream 100 bases:
>100_bases GAAGAAGTTTGTGTAAAAGAGGACAAAGAACATATACTCTATGATAAGTAGCCGATATACAACATGATAAGTAATTGTGG TATCTCCGGGTGAAGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MRTGIVVGVNEQDIAGEEQEMPLSQQFPNLHPESCQDIIKAEDRRVGVVTKKKKRKSSPVSKDMIRSSDQLSTGTLKESD EYGKKRKSKNRKTGSPLKQVKTVIVVGTNKQDIASEEQEMPLSQQLSDLHPESCDQDIVKAEDRRVCVATKEKRRKSSPI SKDMIGSSDQLSIGTLKESDEYGKKRKSKNRKTGSPLKQVKTGIVASANEQDIAGEGQGIPLSHQLLHFESCDQNIVKVE DRKVHVVTREERKSNPVLEDNEYLKQDAKSKVHAGQAVGQPMSCAEKAKAKVSSVEETVGKVCTDQKVKEVSECKNDVYD TSVQHTAVSYVEKVKVGLSDDLGKTLLPIDLKRTVSQQDLNSEYLKQSAKSKVHAGQAVGQPMSYAEKAKVSSVKEAVGK ACTGQKVKGASGFKNDVDETLSASMQHTAVPGMVTPTNIIPARHIVSGVAVFKHLQGYSLEEYQSLVENFRKSVACFSKM HMSYAYQILHNTFIVHNGQIVLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSYGCNSIKYCASYYHDSEIIDE ILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVTNVFKLHDSSFYSEVLSVCCNFMGVSNKDIELHKLCSFVQLSCCIQI AQMYHMMLKVKYSAGDKQDYAQQCISERLAKGPAIKDFMYRALLFGRCACNVRNTFRHLYSPDDKNHIRTVSGLNVPYCM IRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNFVRDALYRPGERTCIKEDIKTYHTIVSSRYDNMISNCSVSR
Sequences:
>Translated_793_residues MRTGIVVGVNEQDIAGEEQEMPLSQQFPNLHPESCQDIIKAEDRRVGVVTKKKKRKSSPVSKDMIRSSDQLSTGTLKESD EYGKKRKSKNRKTGSPLKQVKTVIVVGTNKQDIASEEQEMPLSQQLSDLHPESCDQDIVKAEDRRVCVATKEKRRKSSPI SKDMIGSSDQLSIGTLKESDEYGKKRKSKNRKTGSPLKQVKTGIVASANEQDIAGEGQGIPLSHQLLHFESCDQNIVKVE DRKVHVVTREERKSNPVLEDNEYLKQDAKSKVHAGQAVGQPMSCAEKAKAKVSSVEETVGKVCTDQKVKEVSECKNDVYD TSVQHTAVSYVEKVKVGLSDDLGKTLLPIDLKRTVSQQDLNSEYLKQSAKSKVHAGQAVGQPMSYAEKAKVSSVKEAVGK ACTGQKVKGASGFKNDVDETLSASMQHTAVPGMVTPTNIIPARHIVSGVAVFKHLQGYSLEEYQSLVENFRKSVACFSKM HMSYAYQILHNTFIVHNGQIVLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSYGCNSIKYCASYYHDSEIIDE ILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVTNVFKLHDSSFYSEVLSVCCNFMGVSNKDIELHKLCSFVQLSCCIQI AQMYHMMLKVKYSAGDKQDYAQQCISERLAKGPAIKDFMYRALLFGRCACNVRNTFRHLYSPDDKNHIRTVSGLNVPYCM IRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNFVRDALYRPGERTCIKEDIKTYHTIVSSRYDNMISNCSVSR >Mature_793_residues MRTGIVVGVNEQDIAGEEQEMPLSQQFPNLHPESCQDIIKAEDRRVGVVTKKKKRKSSPVSKDMIRSSDQLSTGTLKESD EYGKKRKSKNRKTGSPLKQVKTVIVVGTNKQDIASEEQEMPLSQQLSDLHPESCDQDIVKAEDRRVCVATKEKRRKSSPI SKDMIGSSDQLSIGTLKESDEYGKKRKSKNRKTGSPLKQVKTGIVASANEQDIAGEGQGIPLSHQLLHFESCDQNIVKVE DRKVHVVTREERKSNPVLEDNEYLKQDAKSKVHAGQAVGQPMSCAEKAKAKVSSVEETVGKVCTDQKVKEVSECKNDVYD TSVQHTAVSYVEKVKVGLSDDLGKTLLPIDLKRTVSQQDLNSEYLKQSAKSKVHAGQAVGQPMSYAEKAKVSSVKEAVGK ACTGQKVKGASGFKNDVDETLSASMQHTAVPGMVTPTNIIPARHIVSGVAVFKHLQGYSLEEYQSLVENFRKSVACFSKM HMSYAYQILHNTFIVHNGQIVLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSYGCNSIKYCASYYHDSEIIDE ILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVTNVFKLHDSSFYSEVLSVCCNFMGVSNKDIELHKLCSFVQLSCCIQI AQMYHMMLKVKYSAGDKQDYAQQCISERLAKGPAIKDFMYRALLFGRCACNVRNTFRHLYSPDDKNHIRTVSGLNVPYCM IRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNFVRDALYRPGERTCIKEDIKTYHTIVSSRYDNMISNCSVSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88816; Mature: 88816
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGIVVGVNEQDIAGEEQEMPLSQQFPNLHPESCQDIIKAEDRRVGVVTKKKKRKSSPV CCCCEEEECCCHHCCCCHHCCCHHHHCCCCCHHHHHHHHHCCCCEECCEECHHHHCCCCC SKDMIRSSDQLSTGTLKESDEYGKKRKSKNRKTGSPLKQVKTVIVVGTNKQDIASEEQEM HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCEEEEECCCHHHHCCHHHCC PLSQQLSDLHPESCDQDIVKAEDRRVCVATKEKRRKSSPISKDMIGSSDQLSIGTLKESD CHHHHHHHCCCCCCCHHHHHCCCCEEEEECHHHHHHCCCCCHHHCCCCCCEEECCCCCCH EYGKKRKSKNRKTGSPLKQVKTGIVASANEQDIAGEGQGIPLSHQLLHFESCDQNIVKVE HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEC DRKVHVVTREERKSNPVLEDNEYLKQDAKSKVHAGQAVGQPMSCAEKAKAKVSSVEETVG CCEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KVCTDQKVKEVSECKNDVYDTSVQHTAVSYVEKVKVGLSDDLGKTLLPIDLKRTVSQQDL HHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC NSEYLKQSAKSKVHAGQAVGQPMSYAEKAKVSSVKEAVGKACTGQKVKGASGFKNDVDET CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LSASMQHTAVPGMVTPTNIIPARHIVSGVAVFKHLQGYSLEEYQSLVENFRKSVACFSKM HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HMSYAYQILHNTFIVHNGQIVLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSY HHHHHHHHHHHEEEEECCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC GCNSIKYCASYYHDSEIIDEILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVTNVFKLH CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC DSSFYSEVLSVCCNFMGVSNKDIELHKLCSFVQLSCCIQIAQMYHMMLKVKYSAGDKQDY CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AQQCISERLAKGPAIKDFMYRALLFGRCACNVRNTFRHLYSPDDKNHIRTVSGLNVPYCM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEE IRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNFVRDALYRPGERTCIKEDIKTYHTIVSS EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RYDNMISNCSVSR HHHHHHHCCCCCC >Mature Secondary Structure MRTGIVVGVNEQDIAGEEQEMPLSQQFPNLHPESCQDIIKAEDRRVGVVTKKKKRKSSPV CCCCEEEECCCHHCCCCHHCCCHHHHCCCCCHHHHHHHHHCCCCEECCEECHHHHCCCCC SKDMIRSSDQLSTGTLKESDEYGKKRKSKNRKTGSPLKQVKTVIVVGTNKQDIASEEQEM HHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCEEEEECCCHHHHCCHHHCC PLSQQLSDLHPESCDQDIVKAEDRRVCVATKEKRRKSSPISKDMIGSSDQLSIGTLKESD CHHHHHHHCCCCCCCHHHHHCCCCEEEEECHHHHHHCCCCCHHHCCCCCCEEECCCCCCH EYGKKRKSKNRKTGSPLKQVKTGIVASANEQDIAGEGQGIPLSHQLLHFESCDQNIVKVE HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEC DRKVHVVTREERKSNPVLEDNEYLKQDAKSKVHAGQAVGQPMSCAEKAKAKVSSVEETVG CCEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH KVCTDQKVKEVSECKNDVYDTSVQHTAVSYVEKVKVGLSDDLGKTLLPIDLKRTVSQQDL HHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC NSEYLKQSAKSKVHAGQAVGQPMSYAEKAKVSSVKEAVGKACTGQKVKGASGFKNDVDET CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH LSASMQHTAVPGMVTPTNIIPARHIVSGVAVFKHLQGYSLEEYQSLVENFRKSVACFSKM HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH HMSYAYQILHNTFIVHNGQIVLKPEIEQFLLKTTSNIKLCTFIIKIGIVDQVMARLGNSY HHHHHHHHHHHEEEEECCEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC GCNSIKYCASYYHDSEIIDEILIRFYGTSYSSFSEVSQQVRHDTVDCLKKRNVTNVFKLH CCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC DSSFYSEVLSVCCNFMGVSNKDIELHKLCSFVQLSCCIQIAQMYHMMLKVKYSAGDKQDY CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AQQCISERLAKGPAIKDFMYRALLFGRCACNVRNTFRHLYSPDDKNHIRTVSGLNVPYCM HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEE IRVSSKGIIPKIESYIKRNKMDFGVFVDDIVNFVRDALYRPGERTCIKEDIKTYHTIVSS EEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RYDNMISNCSVSR HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA