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The map label for this gene is rpmJ [H]

Identifier: 88657896

GI number: 88657896

Start: 671442

End: 671570

Strand: Reverse

Name: rpmJ [H]

Synonym: ECH_0656

Alternate gene names: 88657896

Gene position: 671570-671442 (Counterclockwise)

Preceding gene: 88658050

Following gene: 88658347

Centisome position: 57.09

GC content: 34.88

Gene sequence:

>129_bases
ATGAAAGTTATTGGGTCGCTTAAGTCTGCAAAAGTAAGGGATAAGGATTGTAGAGTTGTACGCAGAAAAGGCCGTATTTA
TGTGATAAATAAGAAAAATCCAAGATTTAAAGCAAGGCAGGGATATTAA

Upstream 100 bases:

>100_bases
TTTGCTAAACCGTTATACGGCTTTAACCCGTATCGAGGGTTCGAATCCCTCTCTCTCCGCCACAAGAGTACGTAATTTTA
TTGTCGAGTAAGGAAGAGAG

Downstream 100 bases:

>100_bases
TTAAAGTAGTTTCAAGGTGCTATTATAAAGTGTTTTTTGTGATTTTATTTTGAAACTCACATTAAATTATTTCACCTTAG
ATTTTTTCTTTATATAGTAA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MKVIGSLKSAKVRDKDCRVVRRKGRIYVINKKNPRFKARQGY

Sequences:

>Translated_42_residues
MKVIGSLKSAKVRDKDCRVVRRKGRIYVINKKNPRFKARQGY
>Mature_42_residues
MKVIGSLKSAKVRDKDCRVVRRKGRIYVINKKNPRFKARQGY

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000473 [H]

Pfam domain/function: PF00444 Ribosomal_L36 [H]

EC number: NA

Molecular weight: Translated: 4964; Mature: 4964

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIGSLKSAKVRDKDCRVVRRKGRIYVINKKNPRFKARQGY
CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKVIGSLKSAKVRDKDCRVVRRKGRIYVINKKNPRFKARQGY
CCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA