| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657863
Identifier: 88657863
GI number: 88657863
Start: 259182
End: 259736
Strand: Direct
Name: 88657863
Synonym: ECH_0276
Alternate gene names: NA
Gene position: 259182-259736 (Clockwise)
Preceding gene: 88658593
Following gene: 88658011
Centisome position: 22.03
GC content: 31.89
Gene sequence:
>555_bases ATGTCAAAAATTTATCCAGTTGTTCAGAAAGAGGTAAGTGTTATGCTTGATATGAAACTTCAAGGAGCTGATCCGTCACA TAATAAAGATTTCTTAAAAATTACTAATGCAATAAATTATATACGAGACCAAATAATGTTATTACGGTGTTCTTATCCAC ATAATTTGAGAGTTCAATGTGCAATGTTGAGTATGTTTTGTGTGAGGGCAAAAGCACGTATAATGGGTTTGTATCAAAAT GAGGAAGGCTTCAGTGCAGAGGAAAAAGATGAGTTATCAAGTTTACGAATGAGTATGTACAGAGATGGTATAGAATATAC TACAGAGTCTTTGCAATATGATATTATTAGGTTACTACAGTCTGTAGTTTCTTGTATTAACGGTTTAGTGCGGGGTCATA CTTTATTTGTGTATTATGAAGAAGAACAGTGGATTTTGTGCCGCATTAAAGCAGCATATAAAATTTGTCAAGAAGGTATG CAATCTATTAATAAAGAAAAAACAGAATATGTACAAATTCAGTGTTTATTAGCTCCTACATTAGGATATACTTAA
Upstream 100 bases:
>100_bases AAAAATCGATTTTTTTACTGCGGTTTTGATGTTGATAGCAATTTTTGTAATGCTTTTAATAATACTGATAGTTTCTTATA ATATATGTTTTAGTAGAAGC
Downstream 100 bases:
>100_bases TGTATATTATTTTTGTTGTTGTAAGTCTAATAGTATATAATTGTTATTTATATTATGTGAAATTCGAATTCATGTTTTAT TTAGACATTAAGTAGAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSKIYPVVQKEVSVMLDMKLQGADPSHNKDFLKITNAINYIRDQIMLLRCSYPHNLRVQCAMLSMFCVRAKARIMGLYQN EEGFSAEEKDELSSLRMSMYRDGIEYTTESLQYDIIRLLQSVVSCINGLVRGHTLFVYYEEEQWILCRIKAAYKICQEGM QSINKEKTEYVQIQCLLAPTLGYT
Sequences:
>Translated_184_residues MSKIYPVVQKEVSVMLDMKLQGADPSHNKDFLKITNAINYIRDQIMLLRCSYPHNLRVQCAMLSMFCVRAKARIMGLYQN EEGFSAEEKDELSSLRMSMYRDGIEYTTESLQYDIIRLLQSVVSCINGLVRGHTLFVYYEEEQWILCRIKAAYKICQEGM QSINKEKTEYVQIQCLLAPTLGYT >Mature_183_residues SKIYPVVQKEVSVMLDMKLQGADPSHNKDFLKITNAINYIRDQIMLLRCSYPHNLRVQCAMLSMFCVRAKARIMGLYQNE EGFSAEEKDELSSLRMSMYRDGIEYTTESLQYDIIRLLQSVVSCINGLVRGHTLFVYYEEEQWILCRIKAAYKICQEGMQ SINKEKTEYVQIQCLLAPTLGYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21380; Mature: 21249
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIYPVVQKEVSVMLDMKLQGADPSHNKDFLKITNAINYIRDQIMLLRCSYPHNLRVQC CCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH AMLSMFCVRAKARIMGLYQNEEGFSAEEKDELSSLRMSMYRDGIEYTTESLQYDIIRLLQ HHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SVVSCINGLVRGHTLFVYYEEEQWILCRIKAAYKICQEGMQSINKEKTEYVQIQCLLAPT HHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEECC LGYT CCCC >Mature Secondary Structure SKIYPVVQKEVSVMLDMKLQGADPSHNKDFLKITNAINYIRDQIMLLRCSYPHNLRVQC CCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHH AMLSMFCVRAKARIMGLYQNEEGFSAEEKDELSSLRMSMYRDGIEYTTESLQYDIIRLLQ HHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH SVVSCINGLVRGHTLFVYYEEEQWILCRIKAAYKICQEGMQSINKEKTEYVQIQCLLAPT HHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEECC LGYT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA