| Definition | Ehrlichia chaffeensis str. Arkansas, complete genome. |
|---|---|
| Accession | NC_007799 |
| Length | 1,176,248 |
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The map label for this gene is 88657781
Identifier: 88657781
GI number: 88657781
Start: 217847
End: 219082
Strand: Direct
Name: 88657781
Synonym: ECH_0230
Alternate gene names: NA
Gene position: 217847-219082 (Clockwise)
Preceding gene: 88658326
Following gene: 88657942
Centisome position: 18.52
GC content: 32.2
Gene sequence:
>1236_bases ATGGGGGATGTTTTGAATAGAAAATTTTTAGCATGGTTTTTAGTCTCAATGTTTTATGCGTATCAGTATATATTGAGAGT AATTCCTAATGTTATTGTCTCTGTGTCTATGGAGAAGTTCAAAATTAGTGCTATGGCATTTGGTCAATTTTCTGGTTTAT ATTATATTGGATATACGTTAGCACATATACCGCTAGGTATTCTTTTAGATAAATATGGGCCTAAGATAGTATTACCAATT TGTGCAGCTCTAACGTTTATTGGATTAGTGCCATTGCTAATATCAGATGTGTGGTTATTTGCTCAAATTGGGAGAATAAT TACAGGTGTAGGTTCAGCTGGTTCTGCTCTTGGCCTTTTTAAAGTTGCTAGTATGTACTATGGCAACAGATTTGCTAGAA TGTCTGGTATTTCTGTTATAATAGGACTGCTAGGTGCAATGTATGGAGGACTGCCAATTTTATCTTTGTTAAATAAATTT GGTTGGGAAAGTTTATTCTTAGTATTTATTATTATAGGAGCTGTTATAGCGCTGTTGCTATATTTGTTTATGTTGCCTTA TGATAAAGACTCCAATGTTGAAGATAATAAAGGTCTCTGTGATAAAATTAAGTTGATTGTATTTAATAAGTACATTGTTA TGATCAGCTTACTTGCAGGCTTTATGATTGGACCTTTGGAAGGTTTTGCTGATGGATGGGTTACTTCATTTTTAAAGGCA GTTAGTAATATGGATAAAGAAGTAGCTGCTTTATTGCCTTCTACAATATTTATTGGTATGTGCTTTGGATTGTTTGTCTT ACCATATATGTTGGAGAAGAAATCATTTAATAGTTGGAATATACTTATCACATCTGCTTTGGGGATGTTGTTTCCTTTCC TGATGTTATATATCAGTAGTTCGGTTATATTGGTCACAATATCATTTTTTATGATAGGGTTTTTTTCATCATATCAGATT ATAGCAACTTGTAAGGTACTAAGTTATGTTAGTAATAATGTAGTTGCATTAGCTACTGCTGTAAATAACATGATAGCTAT GGCTTTTGGTTATTTCTTTCATACTGCTATATCTTGTGTAATAGATTTGTTATGGGATGGAAAAATTGTAGATTCAGAGC CAGTATATACTAAGGCATTAATGCTAAAATCTATGTTATTTATTCCTGGTGGATTGCTTATAGGAGCAATAGGGTTTATT TACCTGAAATATTTGGATAAGAAAGAGGGTAAGTAA
Upstream 100 bases:
>100_bases TGTACATTTGGAAGTAATAAAGGTATTGCAAATGGTATGAATTTGTGTGTAGGATCTACACCTTGTTTTTTTTTATAATT TTAATGGTTTTAAATTAATC
Downstream 100 bases:
>100_bases CACATGGTACTACAGTTATATATAATCATGTATCGATTATATATAACTGTGTGCTTTGATAAAACGATATTAGTTTGTAT AGTTTTTTGTGATTTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Transporter; Permease; Sugar Phosphate Permease; Sugar Transporter; Transporter MFS Superfamily; Facilitator Superfamily Protein; Facilitator Family Transporter Transporter; Facilitator Superfamily Sugar Transporter; Facilitator Superfamily Permease; Transporter Facilitator Family; Sugar Transport Family Protein; Multidrug ABC Transporter; NasA Protein; Bicyclomycin Resistance Protein; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Facilitator Family Protein
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MGDVLNRKFLAWFLVSMFYAYQYILRVIPNVIVSVSMEKFKISAMAFGQFSGLYYIGYTLAHIPLGILLDKYGPKIVLPI CAALTFIGLVPLLISDVWLFAQIGRIITGVGSAGSALGLFKVASMYYGNRFARMSGISVIIGLLGAMYGGLPILSLLNKF GWESLFLVFIIIGAVIALLLYLFMLPYDKDSNVEDNKGLCDKIKLIVFNKYIVMISLLAGFMIGPLEGFADGWVTSFLKA VSNMDKEVAALLPSTIFIGMCFGLFVLPYMLEKKSFNSWNILITSALGMLFPFLMLYISSSVILVTISFFMIGFFSSYQI IATCKVLSYVSNNVVALATAVNNMIAMAFGYFFHTAISCVIDLLWDGKIVDSEPVYTKALMLKSMLFIPGGLLIGAIGFI YLKYLDKKEGK
Sequences:
>Translated_411_residues MGDVLNRKFLAWFLVSMFYAYQYILRVIPNVIVSVSMEKFKISAMAFGQFSGLYYIGYTLAHIPLGILLDKYGPKIVLPI CAALTFIGLVPLLISDVWLFAQIGRIITGVGSAGSALGLFKVASMYYGNRFARMSGISVIIGLLGAMYGGLPILSLLNKF GWESLFLVFIIIGAVIALLLYLFMLPYDKDSNVEDNKGLCDKIKLIVFNKYIVMISLLAGFMIGPLEGFADGWVTSFLKA VSNMDKEVAALLPSTIFIGMCFGLFVLPYMLEKKSFNSWNILITSALGMLFPFLMLYISSSVILVTISFFMIGFFSSYQI IATCKVLSYVSNNVVALATAVNNMIAMAFGYFFHTAISCVIDLLWDGKIVDSEPVYTKALMLKSMLFIPGGLLIGAIGFI YLKYLDKKEGK >Mature_410_residues GDVLNRKFLAWFLVSMFYAYQYILRVIPNVIVSVSMEKFKISAMAFGQFSGLYYIGYTLAHIPLGILLDKYGPKIVLPIC AALTFIGLVPLLISDVWLFAQIGRIITGVGSAGSALGLFKVASMYYGNRFARMSGISVIIGLLGAMYGGLPILSLLNKFG WESLFLVFIIIGAVIALLLYLFMLPYDKDSNVEDNKGLCDKIKLIVFNKYIVMISLLAGFMIGPLEGFADGWVTSFLKAV SNMDKEVAALLPSTIFIGMCFGLFVLPYMLEKKSFNSWNILITSALGMLFPFLMLYISSSVILVTISFFMIGFFSSYQII ATCKVLSYVSNNVVALATAVNNMIAMAFGYFFHTAISCVIDLLWDGKIVDSEPVYTKALMLKSMLFIPGGLLIGAIGFIY LKYLDKKEGK
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45405; Mature: 45274
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVLNRKFLAWFLVSMFYAYQYILRVIPNVIVSVSMEKFKISAMAFGQFSGLYYIGYTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AHIPLGILLDKYGPKIVLPICAALTFIGLVPLLISDVWLFAQIGRIITGVGSAGSALGLF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KVASMYYGNRFARMSGISVIIGLLGAMYGGLPILSLLNKFGWESLFLVFIIIGAVIALLL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YLFMLPYDKDSNVEDNKGLCDKIKLIVFNKYIVMISLLAGFMIGPLEGFADGWVTSFLKA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNMDKEVAALLPSTIFIGMCFGLFVLPYMLEKKSFNSWNILITSALGMLFPFLMLYISS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC SVILVTISFFMIGFFSSYQIIATCKVLSYVSNNVVALATAVNNMIAMAFGYFFHTAISCV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IDLLWDGKIVDSEPVYTKALMLKSMLFIPGGLLIGAIGFIYLKYLDKKEGK HHHHHCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GDVLNRKFLAWFLVSMFYAYQYILRVIPNVIVSVSMEKFKISAMAFGQFSGLYYIGYTL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AHIPLGILLDKYGPKIVLPICAALTFIGLVPLLISDVWLFAQIGRIITGVGSAGSALGLF HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KVASMYYGNRFARMSGISVIIGLLGAMYGGLPILSLLNKFGWESLFLVFIIIGAVIALLL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH YLFMLPYDKDSNVEDNKGLCDKIKLIVFNKYIVMISLLAGFMIGPLEGFADGWVTSFLKA HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSNMDKEVAALLPSTIFIGMCFGLFVLPYMLEKKSFNSWNILITSALGMLFPFLMLYISS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC SVILVTISFFMIGFFSSYQIIATCKVLSYVSNNVVALATAVNNMIAMAFGYFFHTAISCV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IDLLWDGKIVDSEPVYTKALMLKSMLFIPGGLLIGAIGFIYLKYLDKKEGK HHHHHCCEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA