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The map label for this gene is 88657579

Identifier: 88657579

GI number: 88657579

Start: 1098341

End: 1098637

Strand: Reverse

Name: 88657579

Synonym: ECH_1069

Alternate gene names: NA

Gene position: 1098637-1098341 (Counterclockwise)

Preceding gene: 88658605

Following gene: 88657827

Centisome position: 93.4

GC content: 27.95

Gene sequence:

>297_bases
TTGAACATAAATGTTATGGATGAATTACTAGTAAAACGTAAGAGATTATTATATAGGAGTTTGCATAGAGGGTGCAAAGA
AATGGATATAATACTTGGTAATTTTGCATTGCATTGCATTCATCTATTGTCTTCTAAGGACGTTGATGAATATGAGAAAA
TTGTCAATACTAGTGATTATCAACTTTATAAGTATATTACAGGAGAGGAATTAATTCCACAGTACTTAGATAATAACATT
ATGAAAGATATTATCAGGATTAATGAGTCATTAATAAAATCAAAATTTGCAGACTGA

Upstream 100 bases:

>100_bases
AGAACACTAGATGTCATTAAAACTAAATTGGATAATATAGTATATTTATATGGTTGACAACATAATATGTAATAATTTTA
ATTAGACAATTTGAAATCTG

Downstream 100 bases:

>100_bases
ACATAAGGTATAATATGTCTAGGTATATTAGAAGTGTGTATTGTTTGACATCACTTAATGTTAATTTGAACATATTTGTT
AATTATTGAATTTATTATAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MNINVMDELLVKRKRLLYRSLHRGCKEMDIILGNFALHCIHLLSSKDVDEYEKIVNTSDYQLYKYITGEELIPQYLDNNI
MKDIIRINESLIKSKFAD

Sequences:

>Translated_98_residues
MNINVMDELLVKRKRLLYRSLHRGCKEMDIILGNFALHCIHLLSSKDVDEYEKIVNTSDYQLYKYITGEELIPQYLDNNI
MKDIIRINESLIKSKFAD
>Mature_98_residues
MNINVMDELLVKRKRLLYRSLHRGCKEMDIILGNFALHCIHLLSSKDVDEYEKIVNTSDYQLYKYITGEELIPQYLDNNI
MKDIIRINESLIKSKFAD

Specific function: Unknown

COG id: COG2938

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11609; Mature: 11609

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINVMDELLVKRKRLLYRSLHRGCKEMDIILGNFALHCIHLLSSKDVDEYEKIVNTSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
QLYKYITGEELIPQYLDNNIMKDIIRINESLIKSKFAD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNINVMDELLVKRKRLLYRSLHRGCKEMDIILGNFALHCIHLLSSKDVDEYEKIVNTSDY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
QLYKYITGEELIPQYLDNNIMKDIIRINESLIKSKFAD
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA