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The map label for this gene is rpsU

Identifier: 88608841

GI number: 88608841

Start: 734719

End: 734913

Strand: Reverse

Name: rpsU

Synonym: NSE_0827

Alternate gene names: 88608841

Gene position: 734913-734719 (Counterclockwise)

Preceding gene: 88608744

Following gene: 88608262

Centisome position: 85.55

GC content: 45.64

Gene sequence:

>195_bases
TTGGGACAAGTTTTTATGGTTCATCATGGAGATGTTGAACAGGCGCTTCGTAGGCTGAAGCAACATTTATCAAGAGAAGG
TATAACACCAGGAAGGAAGCGTATTTTTGAGAAGCCTTCTGAAAAGAGGCACAGGAGGGCTGTAGAAACTAGGCGCAAGA
TAAGAAAGCAGAAGCTCCGTGTGGTGCCGTACTGA

Upstream 100 bases:

>100_bases
ATTAAATCTGTTCGAGGAGAGTAAATACCCTTGGTGAGATGGTGTTTTTTAGCTCTGATATGTTAGAATCTCCGGTGTTA
TCTTGAACAGGAGGCATAGT

Downstream 100 bases:

>100_bases
GTCAGCTCCGCCCTGCCCGGGTGCGCAGTTAAATTGCACCCCTTGCGCTTTTTTTGTGTTGTATTCTCCCGAGTACTTCT
TTTAGCGCGAACACAAGTTC

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MGQVFMVHHGDVEQALRRLKQHLSREGITPGRKRIFEKPSEKRHRRAVETRRKIRKQKLRVVPY

Sequences:

>Translated_64_residues
MGQVFMVHHGDVEQALRRLKQHLSREGITPGRKRIFEKPSEKRHRRAVETRRKIRKQKLRVVPY
>Mature_63_residues
GQVFMVHHGDVEQALRRLKQHLSREGITPGRKRIFEKPSEKRHRRAVETRRKIRKQKLRVVPY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS21_NEOSM (Q2GCU9)

Other databases:

- EMBL:   CP000237
- RefSeq:   YP_506697.1
- STRING:   Q2GCU9
- GeneID:   3931650
- GenomeReviews:   CP000237_GR
- KEGG:   nse:NSE_0827
- TIGR:   NSE_0827
- eggNOG:   NOG114281
- ProtClustDB:   CLSK2528181
- BioCyc:   NSEN222891:NSE_0827-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00358
- InterPro:   IPR001911
- TIGRFAMs:   TIGR00030

Pfam domain/function: PF01165 Ribosomal_S21

EC number: NA

Molecular weight: Translated: 7756; Mature: 7625

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: PS01181 RIBOSOMAL_S21

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVFMVHHGDVEQALRRLKQHLSREGITPGRKRIFEKPSEKRHRRAVETRRKIRKQKLR
CCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
VVPY
CCCC
>Mature Secondary Structure 
GQVFMVHHGDVEQALRRLKQHLSREGITPGRKRIFEKPSEKRHRRAVETRRKIRKQKLR
CCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
VVPY
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA