| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is leuS
Identifier: 88608827
GI number: 88608827
Start: 425402
End: 427957
Strand: Reverse
Name: leuS
Synonym: NSE_0506
Alternate gene names: 88608827
Gene position: 427957-425402 (Counterclockwise)
Preceding gene: 88608081
Following gene: 88608123
Centisome position: 49.82
GC content: 39.12
Gene sequence:
>2556_bases GTGTCATGCAACTTGTCTTGTGCTAGAATCCTGTTCGGGCTGTTTACAGTTGGAATACACATGTCGAATTACGATTTTAA GAAAATAGAGCAATTTTCTCAATCATTGTGGGATTTTTCCAGTTGTGACTTCCAGAGAAAAAAGTACTATGTTCTGAGTA TGTTTCCCTACCCGTCTGGAAAACTACATATTGGACATCTGAGAAACTATGTTATTGGAGACGTCTTAGCTCGTTATAAG AGGAGCCAGGGATACAATGTCTTACACCCTATTGGTTGGGATGCGTTTGGTCTACCCGCTGAAAAAGCAGCAATAAATAG CAATATTCACCCAAGGATATGGACAGAAAAAAATATCGCAAAGATGCGAACCTCTCTCAAGAGCATAGGTCTGTCGTATG ATTGGAGCAGAGAACTTTCAACCTGTTCTCCCAAATATTATGAGCACGAACAAAAATTTTTTTTGGCCTTTCTAAAAGCT GGTTTAGCATACAGAAAAAATTCCGAAGTAAATTGGGATCCTATCGACAAAACAGTACTTGCAAACGAACAGGTCATTGA TGGGCGTGGTTGGAGATCGGGTGCGGTTGTCGTGAAGAGAAAGATTCCGCAGTGGTTCCTTAAAATTAGCGACTTTTCTG AAGAACTCCTGAAGGGATTAGAGTCACTTACTGGCTGGCCAGAGAAGGTTAAAACTATGCAAACAAATTGGATAGGAAAA TCTGAAGGGGCAGTGATAAAATTTTCTATAAGCGGATATGAGGAAAGATTTATTGAGGTATTCACTACTAGACCCGAGAC GATCTTTGGAGCGTCATTTTGTGCTATTTCAGTGAATCACCCTTTGGTTAATGAATTAAATTTATTGAGTAATGCAGAGA GAGAAATACTGCGCATACAAACTACCTGTGAGTCAGATCATTACGATGACAACAAAAACTTTTCTGGGACGACAAATCTT GAGAAAGTTCATGAGCAAAAGCTTGGCATTCTAACAAAAATAAAAGTGAAGCATCCCTTTTCCGGCGATGAGCTTCCTTT ATACGTAGCAAATTTTGTATTTGCAGAATACGGTTCGGGGGCAATATTCGGTTGCCCAGCTCATGATACACGAGATTTTG CATTCGCACAGCAATACAATTTACCGTGTTTAAGAGTCATCTCAGCAAAATGCACAAATACTGCACTACCCTACTGTTTG GAAGAAGGAGTAATGTGTAATTCAAATTTCCTAGATGGAATGCAGGTGATAGAGGCACGAAAATTTATAATTGAAAAAAT TTCTTCGATTGGTATTGGTGAGGCAAAGAACTCATATAGATTGCGAGACTGGGGAATATCAAGGCAGCGATATTGGGGCT GTCCAATTCCGGTTGTGTACTGTGAAAAGTGTTCGATGCAACCGGTAAAAGTTGAAGATCTACCTGTCACCCTTCCCGAA GAAGTAGAGTTTACAGTACAGGGTAATCCACTAGAACACCATCCAACATGGAAATACACAAATTGTCCAAAATGTGGCGG TCCTGCAGTTAGGGACACAGATACTTTTGATACATTTTTCGAATCTTCTTGGTATTTTGCGGCTTTTTGCAGTAAAGAAG GAGGAATAGTTAAGGAATCTTGCAAGCGTTTTCTTCCTGTCGATATGTACATCGGCGGAATAGAACATGCAATATTGCAT TTACTTTATGCTAGGTTCTTTACGCGCGCCTTAAACAAATGTGGATACATCGATATAGTGGAACCTTTTCGTAATCTACT CACACAAGGTATGGTTTGTCATGAGACTTACCAGAACTCTTCCGGTGAATATTTGTATCCTGAAGAAGCAAAATCACTGC TGGAAAAAGGTGAAAAAGTTCTGGTTGGCAAAATCGAGAAAATGAGTAAATCCAAAAAAAATGTTGTAGATCTTGAAGAA ATCGTCTCAAAATATGGCGCTGATGCAGCAAGGTTCTTTATTCTTTCTGATAATCCTCCAGAAAACAGTTTTGGATGGTC AGACAGGGGCATAAATGCGTCGTTTAAGTTTTTGCAAAGAATAAAAAATCTTGTAGAAAGATATCTTTCCAGTAAAAACA GTGGTGAGGTTCAAACAGGCCAGAACGTTAAAATCCAGATTAACAAGATTATCTGCGATATGACGAAGTACATGGACGAA ATAAAATTAAATTGCGCAGTTGCAAAGATTCACGAGTTGGTCAACTTGCTGAGCGCGTCCGGAGCATTATCTAAAGAAAC GATTCACGTACTTTTAAGGATACTCGAGCCATTTGCACCACACTTAGCTGAATATTTAGCTTCAAAGCTTGAAAACAATG TCATTCTATATGGTTCCCCGTGGGTTGCTTATAACGAAGTACTCACTCAAAGCGATGCGGTCACATTAATGGTGCGGAAG AATGGAAAATTCGTACAATTGTTAGAAGTAAAAAAGGATTCTTCTGAAGAAGAGATAATTTCCCAAGCAAAAAGATTGAT CAAGAATGCCGTAGTTGATAAAGTTATATATGTTCCTGGTAAGATGGTTAATTTCCTTTGCAGCAGTCCTGGTTAA
Upstream 100 bases:
>100_bases CCTCCTGTTTCACCAGAAAATGTTGCAGATATTACTTAAATTTGGATATAGGAAAACGCTGCAAAGTAGAAAAAAAGAAA GTTGATACACATGTATTATT
Downstream 100 bases:
>100_bases CCGAATGTTTAGAACGTTAAATTTAAGATACTTTGTTGGTATATTCTGCTGTGCGGAATTACAGTTGGGTTTCACTATGG TGGTTTATTAGTTATGGCTT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 851; Mature: 850
Protein sequence:
>851_residues MSCNLSCARILFGLFTVGIHMSNYDFKKIEQFSQSLWDFSSCDFQRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYK RSQGYNVLHPIGWDAFGLPAEKAAINSNIHPRIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKA GLAYRKNSEVNWDPIDKTVLANEQVIDGRGWRSGAVVVKRKIPQWFLKISDFSEELLKGLESLTGWPEKVKTMQTNWIGK SEGAVIKFSISGYEERFIEVFTTRPETIFGASFCAISVNHPLVNELNLLSNAEREILRIQTTCESDHYDDNKNFSGTTNL EKVHEQKLGILTKIKVKHPFSGDELPLYVANFVFAEYGSGAIFGCPAHDTRDFAFAQQYNLPCLRVISAKCTNTALPYCL EEGVMCNSNFLDGMQVIEARKFIIEKISSIGIGEAKNSYRLRDWGISRQRYWGCPIPVVYCEKCSMQPVKVEDLPVTLPE EVEFTVQGNPLEHHPTWKYTNCPKCGGPAVRDTDTFDTFFESSWYFAAFCSKEGGIVKESCKRFLPVDMYIGGIEHAILH LLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNSSGEYLYPEEAKSLLEKGEKVLVGKIEKMSKSKKNVVDLEE IVSKYGADAARFFILSDNPPENSFGWSDRGINASFKFLQRIKNLVERYLSSKNSGEVQTGQNVKIQINKIICDMTKYMDE IKLNCAVAKIHELVNLLSASGALSKETIHVLLRILEPFAPHLAEYLASKLENNVILYGSPWVAYNEVLTQSDAVTLMVRK NGKFVQLLEVKKDSSEEEIISQAKRLIKNAVVDKVIYVPGKMVNFLCSSPG
Sequences:
>Translated_851_residues MSCNLSCARILFGLFTVGIHMSNYDFKKIEQFSQSLWDFSSCDFQRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYK RSQGYNVLHPIGWDAFGLPAEKAAINSNIHPRIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKA GLAYRKNSEVNWDPIDKTVLANEQVIDGRGWRSGAVVVKRKIPQWFLKISDFSEELLKGLESLTGWPEKVKTMQTNWIGK SEGAVIKFSISGYEERFIEVFTTRPETIFGASFCAISVNHPLVNELNLLSNAEREILRIQTTCESDHYDDNKNFSGTTNL EKVHEQKLGILTKIKVKHPFSGDELPLYVANFVFAEYGSGAIFGCPAHDTRDFAFAQQYNLPCLRVISAKCTNTALPYCL EEGVMCNSNFLDGMQVIEARKFIIEKISSIGIGEAKNSYRLRDWGISRQRYWGCPIPVVYCEKCSMQPVKVEDLPVTLPE EVEFTVQGNPLEHHPTWKYTNCPKCGGPAVRDTDTFDTFFESSWYFAAFCSKEGGIVKESCKRFLPVDMYIGGIEHAILH LLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNSSGEYLYPEEAKSLLEKGEKVLVGKIEKMSKSKKNVVDLEE IVSKYGADAARFFILSDNPPENSFGWSDRGINASFKFLQRIKNLVERYLSSKNSGEVQTGQNVKIQINKIICDMTKYMDE IKLNCAVAKIHELVNLLSASGALSKETIHVLLRILEPFAPHLAEYLASKLENNVILYGSPWVAYNEVLTQSDAVTLMVRK NGKFVQLLEVKKDSSEEEIISQAKRLIKNAVVDKVIYVPGKMVNFLCSSPG >Mature_850_residues SCNLSCARILFGLFTVGIHMSNYDFKKIEQFSQSLWDFSSCDFQRKKYYVLSMFPYPSGKLHIGHLRNYVIGDVLARYKR SQGYNVLHPIGWDAFGLPAEKAAINSNIHPRIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAG LAYRKNSEVNWDPIDKTVLANEQVIDGRGWRSGAVVVKRKIPQWFLKISDFSEELLKGLESLTGWPEKVKTMQTNWIGKS EGAVIKFSISGYEERFIEVFTTRPETIFGASFCAISVNHPLVNELNLLSNAEREILRIQTTCESDHYDDNKNFSGTTNLE KVHEQKLGILTKIKVKHPFSGDELPLYVANFVFAEYGSGAIFGCPAHDTRDFAFAQQYNLPCLRVISAKCTNTALPYCLE EGVMCNSNFLDGMQVIEARKFIIEKISSIGIGEAKNSYRLRDWGISRQRYWGCPIPVVYCEKCSMQPVKVEDLPVTLPEE VEFTVQGNPLEHHPTWKYTNCPKCGGPAVRDTDTFDTFFESSWYFAAFCSKEGGIVKESCKRFLPVDMYIGGIEHAILHL LYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNSSGEYLYPEEAKSLLEKGEKVLVGKIEKMSKSKKNVVDLEEI VSKYGADAARFFILSDNPPENSFGWSDRGINASFKFLQRIKNLVERYLSSKNSGEVQTGQNVKIQINKIICDMTKYMDEI KLNCAVAKIHELVNLLSASGALSKETIHVLLRILEPFAPHLAEYLASKLENNVILYGSPWVAYNEVLTQSDAVTLMVRKN GKFVQLLEVKKDSSEEEIISQAKRLIKNAVVDKVIYVPGKMVNFLCSSPG
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=864, Percent_Identity=34.375, Blast_Score=470, Evalue=1e-132, Organism=Homo sapiens, GI46852147, Length=697, Percent_Identity=22.8120516499283, Blast_Score=91, Evalue=5e-18, Organism=Escherichia coli, GI1786861, Length=872, Percent_Identity=39.6788990825688, Blast_Score=652, Evalue=0.0, Organism=Caenorhabditis elegans, GI71997517, Length=243, Percent_Identity=44.0329218106996, Blast_Score=218, Evalue=1e-56, Organism=Caenorhabditis elegans, GI71997510, Length=243, Percent_Identity=44.0329218106996, Blast_Score=218, Evalue=1e-56, Organism=Caenorhabditis elegans, GI212645227, Length=292, Percent_Identity=29.4520547945205, Blast_Score=131, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71980946, Length=149, Percent_Identity=27.5167785234899, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6323414, Length=854, Percent_Identity=37.2365339578454, Blast_Score=536, Evalue=1e-153, Organism=Saccharomyces cerevisiae, GI6321531, Length=408, Percent_Identity=24.2647058823529, Blast_Score=99, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6325217, Length=455, Percent_Identity=21.978021978022, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21355409, Length=764, Percent_Identity=34.2931937172775, Blast_Score=421, Evalue=1e-117, Organism=Drosophila melanogaster, GI281366294, Length=728, Percent_Identity=21.2912087912088, Blast_Score=96, Evalue=1e-19,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 96693; Mature: 96562
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCNLSCARILFGLFTVGIHMSNYDFKKIEQFSQSLWDFSSCDFQRKKYYVLSMFPYPSG CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC KLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAAINSNIHPRIWTEKNIA CEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCEECCHHHH KMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAYRKNSEVNWDPIDKTVL HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ANEQVIDGRGWRSGAVVVKRKIPQWFLKISDFSEELLKGLESLTGWPEKVKTMQTNWIGK CCCEEECCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC SEGAVIKFSISGYEERFIEVFTTRPETIFGASFCAISVNHPLVNELNLLSNAEREILRIQ CCCCEEEEEECCHHHHHHHHHCCCCCCEECCEEEEEECCCCCHHHHHHHHCCCHHHEEEE TTCESDHYDDNKNFSGTTNLEKVHEQKLGILTKIKVKHPFSGDELPLYVANFVFAEYGSG ECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCC AIFGCPAHDTRDFAFAQQYNLPCLRVISAKCTNTALPYCLEEGVMCNSNFLDGMQVIEAR CEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCEECCCCHHHHHHHHHH KFIIEKISSIGIGEAKNSYRLRDWGISRQRYWGCPIPVVYCEKCSMQPVKVEDLPVTLPE HHHHHHHHHCCCCCCCCCCEEHHCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCC EVEFTVQGNPLEHHPTWKYTNCPKCGGPAVRDTDTFDTFFESSWYFAAFCSKEGGIVKES CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHH CKRFLPVDMYIGGIEHAILHLLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNS HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCEEHHHHCCC SGEYLYPEEAKSLLEKGEKVLVGKIEKMSKSKKNVVDLEEIVSKYGADAARFFILSDNPP CCCEECHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCC ENSFGWSDRGINASFKFLQRIKNLVERYLSSKNSGEVQTGQNVKIQINKIICDMTKYMDE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHHHHHHHHHHHHHH IKLNCAVAKIHELVNLLSASGALSKETIHVLLRILEPFAPHLAEYLASKLENNVILYGSP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC WVAYNEVLTQSDAVTLMVRKNGKFVQLLEVKKDSSEEEIISQAKRLIKNAVVDKVIYVPG CHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCH KMVNFLCSSPG HHHHHHHCCCC >Mature Secondary Structure SCNLSCARILFGLFTVGIHMSNYDFKKIEQFSQSLWDFSSCDFQRKKYYVLSMFPYPSG CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCC KLHIGHLRNYVIGDVLARYKRSQGYNVLHPIGWDAFGLPAEKAAINSNIHPRIWTEKNIA CEEHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCEECCHHHH KMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAYRKNSEVNWDPIDKTVL HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH ANEQVIDGRGWRSGAVVVKRKIPQWFLKISDFSEELLKGLESLTGWPEKVKTMQTNWIGK CCCEEECCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC SEGAVIKFSISGYEERFIEVFTTRPETIFGASFCAISVNHPLVNELNLLSNAEREILRIQ CCCCEEEEEECCHHHHHHHHHCCCCCCEECCEEEEEECCCCCHHHHHHHHCCCHHHEEEE TTCESDHYDDNKNFSGTTNLEKVHEQKLGILTKIKVKHPFSGDELPLYVANFVFAEYGSG ECCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCC AIFGCPAHDTRDFAFAQQYNLPCLRVISAKCTNTALPYCLEEGVMCNSNFLDGMQVIEAR CEEECCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCEECCCCHHHHHHHHHH KFIIEKISSIGIGEAKNSYRLRDWGISRQRYWGCPIPVVYCEKCSMQPVKVEDLPVTLPE HHHHHHHHHCCCCCCCCCCEEHHCCCCCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCC EVEFTVQGNPLEHHPTWKYTNCPKCGGPAVRDTDTFDTFFESSWYFAAFCSKEGGIVKES CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHH CKRFLPVDMYIGGIEHAILHLLYARFFTRALNKCGYIDIVEPFRNLLTQGMVCHETYQNS HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCEEHHHHCCC SGEYLYPEEAKSLLEKGEKVLVGKIEKMSKSKKNVVDLEEIVSKYGADAARFFILSDNPP CCCEECHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCC ENSFGWSDRGINASFKFLQRIKNLVERYLSSKNSGEVQTGQNVKIQINKIICDMTKYMDE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHHHHHHHHHHHHHH IKLNCAVAKIHELVNLLSASGALSKETIHVLLRILEPFAPHLAEYLASKLENNVILYGSP HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC WVAYNEVLTQSDAVTLMVRKNGKFVQLLEVKKDSSEEEIISQAKRLIKNAVVDKVIYVPG CHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCH KMVNFLCSSPG HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA