Click here to switch to the map view.

The map label for this gene is 88608746

Identifier: 88608746

GI number: 88608746

Start: 23916

End: 24077

Strand: Direct

Name: 88608746

Synonym: NSE_0028

Alternate gene names: NA

Gene position: 23916-24077 (Clockwise)

Preceding gene: 88608322

Following gene: 88608198

Centisome position: 2.78

GC content: 35.19

Gene sequence:

>162_bases
ATGAATAGTTTTTATAGGTGTATTACTGAAGGAGGTGTTGAAAGACGATTTGTCCTAATTGTTTTGAAAAATAGAGAGGA
TGTTCTTAATAACGTAGCTGATTATAGGTGGTTTACAAAAGGTTTGCCCTTAGGAAGGACATCAATTAGGGCTTCGTGCT
AA

Upstream 100 bases:

>100_bases
TCAGGCAGCTTATAGAAGATATTGAAAGGCTTTTTCTTAAAAGAAGCATTAACTAGGCCTTTATCTCTATTGCTTTTGGA
TAGCAATTATAAAGTAGTTC

Downstream 100 bases:

>100_bases
TCATTTTGTAAAGCAATCTTGATCAACCTACAAAACTTGAAGCTATTTCAACTAGCGTTCTCTATGCTAGTCGTTTTGCG
AAATAGAGAAAGGGTGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MNSFYRCITEGGVERRFVLIVLKNREDVLNNVADYRWFTKGLPLGRTSIRASC

Sequences:

>Translated_53_residues
MNSFYRCITEGGVERRFVLIVLKNREDVLNNVADYRWFTKGLPLGRTSIRASC
>Mature_53_residues
MNSFYRCITEGGVERRFVLIVLKNREDVLNNVADYRWFTKGLPLGRTSIRASC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6166; Mature: 6166

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFYRCITEGGVERRFVLIVLKNREDVLNNVADYRWFTKGLPLGRTSIRASC
CCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSFYRCITEGGVERRFVLIVLKNREDVLNNVADYRWFTKGLPLGRTSIRASC
CCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA