| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608726
Identifier: 88608726
GI number: 88608726
Start: 116994
End: 118001
Strand: Direct
Name: 88608726
Synonym: NSE_0145
Alternate gene names: NA
Gene position: 116994-118001 (Clockwise)
Preceding gene: 88608752
Following gene: 88608012
Centisome position: 13.62
GC content: 49.7
Gene sequence:
>1008_bases ATGAGTCTTGGTTATGTTCCTTCGTGTAACCTTGGTCCGAGGGCAGGAGCGGCGCGCTTACCTTTTATAGTGCATCTCAT CCTCGGATTGGGCTTAGCATCGTTAGCTATTGCGTTCTCTGCAGTACGTTTGCATCAACATCTTGCTGGGGAGAAGTCTC TAAAGGATCTTGCAGCAAGCGTTGCTCTAATCACAGTAAGTGTTGGGTATGTTTTGTCACTGCCTGCACTCATTGTTTTT TTCAAGCGCTGCTGCGCATCGTCTGAATGTGCTGCAAATCCGGGTAATCCGGTTCTGGAAGATCCGAATCTGGAAGAATA CGGACAGCTTACTTTTCGAGCTGCTTCTCCTCTTTCCAGTTCGAGTGGTGTGTCTCGTACTGCCGGTCCGAATGGTAGGT CCTATTTTTCTGGTTCTGGTCATGCTGCCAGTTTGGGTGATTCGGGTGTGGGGTGGTACAGACGGCCTGTTTGTTCAACT TCTCCTCGTGCTGTCGTCGATCCGGGTAATCCGAATCTGGAAGAATACGGACAGCTTACTTTTCGAGCTGCTTCTCCTCT TTCCAGTTCGAGTGGTGTGTCTCGTACTGCCGGTCCGAATGGTAGGTCCTATTTTTCTGGTTCTGGTCATGCTGCCAGTT TGGGTGATTCGGGTGTGGGGTGGTACAGACGGCCTGTTTGTTCAACTTCTCCTCGTGCTGTCGTCGATCCGGGTAATCCG AATCTGGAAGAATACGGACAGCTTACTTTTCGAGCTGCTTCTCCTCTTTCCAGTTCGAGTGGTGTGTCTCGTACTGTCAG TCTGAATAATTTGGTTTCGGTAGAAGCCGAACAGATTACTTCTCGAGCTGTTTCTCTTCTTTCCAATCGGAGTGGTGTGT CTCGTACTGTCAGTCTGAATAATTTGGTTTCGGCAGAAGCCGAACAGATTACTCTTCGAGCTGCTTCTCCTCTTTCCAGT TCGAGTGGTGTGTCTCGTGAAGAAGAGAAGGAGGGGTGGTCGAGGTGA
Upstream 100 bases:
>100_bases CATTAAAATATATTCGATAACGCATACATAGAGCATAAATTTGTGTGTTTCCACGCCGTTGTTTGAGGGTGTGTTAAGTT GTTTTTTTGTGGAGTAAAGA
Downstream 100 bases:
>100_bases TCCAGGATTGGGGTGTTAGTCACCTTGTTAGAGTGCGCCTTTTAGGTTAGCCTTCGTTGAAAACAAAATCCCGCGAAGGT ACCTAGCTTTGTATAAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVF FKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCST SPRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSS SSGVSREEEKEGWSR
Sequences:
>Translated_335_residues MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVF FKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCST SPRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSS SSGVSREEEKEGWSR >Mature_334_residues SLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVFF KRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTS PRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPN LEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSSS SGVSREEEKEGWSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34748; Mature: 34617
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAAS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VALITVSVGYVLSLPALIVFFKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCC SSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPNLEEYGQLT CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHCCEE FRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP EEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLN CHHHHCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH NLVSAEAEQITLRAASPLSSSSGVSREEEKEGWSR HHHHCCHHEEEEEECCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure SLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAAS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VALITVSVGYVLSLPALIVFFKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCC SSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPNLEEYGQLT CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHCCEE FRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP EEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLN CHHHHCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH NLVSAEAEQITLRAASPLSSSSGVSREEEKEGWSR HHHHCCHHEEEEEECCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA