Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608726

Identifier: 88608726

GI number: 88608726

Start: 116994

End: 118001

Strand: Direct

Name: 88608726

Synonym: NSE_0145

Alternate gene names: NA

Gene position: 116994-118001 (Clockwise)

Preceding gene: 88608752

Following gene: 88608012

Centisome position: 13.62

GC content: 49.7

Gene sequence:

>1008_bases
ATGAGTCTTGGTTATGTTCCTTCGTGTAACCTTGGTCCGAGGGCAGGAGCGGCGCGCTTACCTTTTATAGTGCATCTCAT
CCTCGGATTGGGCTTAGCATCGTTAGCTATTGCGTTCTCTGCAGTACGTTTGCATCAACATCTTGCTGGGGAGAAGTCTC
TAAAGGATCTTGCAGCAAGCGTTGCTCTAATCACAGTAAGTGTTGGGTATGTTTTGTCACTGCCTGCACTCATTGTTTTT
TTCAAGCGCTGCTGCGCATCGTCTGAATGTGCTGCAAATCCGGGTAATCCGGTTCTGGAAGATCCGAATCTGGAAGAATA
CGGACAGCTTACTTTTCGAGCTGCTTCTCCTCTTTCCAGTTCGAGTGGTGTGTCTCGTACTGCCGGTCCGAATGGTAGGT
CCTATTTTTCTGGTTCTGGTCATGCTGCCAGTTTGGGTGATTCGGGTGTGGGGTGGTACAGACGGCCTGTTTGTTCAACT
TCTCCTCGTGCTGTCGTCGATCCGGGTAATCCGAATCTGGAAGAATACGGACAGCTTACTTTTCGAGCTGCTTCTCCTCT
TTCCAGTTCGAGTGGTGTGTCTCGTACTGCCGGTCCGAATGGTAGGTCCTATTTTTCTGGTTCTGGTCATGCTGCCAGTT
TGGGTGATTCGGGTGTGGGGTGGTACAGACGGCCTGTTTGTTCAACTTCTCCTCGTGCTGTCGTCGATCCGGGTAATCCG
AATCTGGAAGAATACGGACAGCTTACTTTTCGAGCTGCTTCTCCTCTTTCCAGTTCGAGTGGTGTGTCTCGTACTGTCAG
TCTGAATAATTTGGTTTCGGTAGAAGCCGAACAGATTACTTCTCGAGCTGTTTCTCTTCTTTCCAATCGGAGTGGTGTGT
CTCGTACTGTCAGTCTGAATAATTTGGTTTCGGCAGAAGCCGAACAGATTACTCTTCGAGCTGCTTCTCCTCTTTCCAGT
TCGAGTGGTGTGTCTCGTGAAGAAGAGAAGGAGGGGTGGTCGAGGTGA

Upstream 100 bases:

>100_bases
CATTAAAATATATTCGATAACGCATACATAGAGCATAAATTTGTGTGTTTCCACGCCGTTGTTTGAGGGTGTGTTAAGTT
GTTTTTTTGTGGAGTAAAGA

Downstream 100 bases:

>100_bases
TCCAGGATTGGGGTGTTAGTCACCTTGTTAGAGTGCGCCTTTTAGGTTAGCCTTCGTTGAAAACAAAATCCCGCGAAGGT
ACCTAGCTTTGTATAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVF
FKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCST
SPRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP
NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSS
SSGVSREEEKEGWSR

Sequences:

>Translated_335_residues
MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVF
FKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCST
SPRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP
NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSS
SSGVSREEEKEGWSR
>Mature_334_residues
SLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAASVALITVSVGYVLSLPALIVFF
KRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTS
PRAVVDPGNPNLEEYGQLTFRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPN
LEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLNNLVSAEAEQITLRAASPLSSS
SGVSREEEKEGWSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34748; Mature: 34617

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAAS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VALITVSVGYVLSLPALIVFFKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCC
SSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPNLEEYGQLT
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHCCEE
FRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP
EEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC
NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLN
CHHHHCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH
NLVSAEAEQITLRAASPLSSSSGVSREEEKEGWSR
HHHHCCHHEEEEEECCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SLGYVPSCNLGPRAGAARLPFIVHLILGLGLASLAIAFSAVRLHQHLAGEKSLKDLAAS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VALITVSVGYVLSLPALIVFFKRCCASSECAANPGNPVLEDPNLEEYGQLTFRAASPLSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCEEEEECCCCCC
SSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNPNLEEYGQLT
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCHHHHCCEE
FRAASPLSSSSGVSRTAGPNGRSYFSGSGHAASLGDSGVGWYRRPVCSTSPRAVVDPGNP
EEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCC
NLEEYGQLTFRAASPLSSSSGVSRTVSLNNLVSVEAEQITSRAVSLLSNRSGVSRTVSLN
CHHHHCCEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHH
NLVSAEAEQITLRAASPLSSSSGVSREEEKEGWSR
HHHHCCHHEEEEEECCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA