Click here to switch to the map view.

The map label for this gene is 88608719

Identifier: 88608719

GI number: 88608719

Start: 106757

End: 107053

Strand: Direct

Name: 88608719

Synonym: NSE_0130

Alternate gene names: NA

Gene position: 106757-107053 (Clockwise)

Preceding gene: 88608469

Following gene: 88608320

Centisome position: 12.43

GC content: 46.13

Gene sequence:

>297_bases
GTGGTACAAAGGGGCTACCATGACGCTGTTACATCGTATACTGGGAGACCTTTAACGTTCTCGTGGTTGCATTCGTATAG
CTCTGTACTTACTGCAGGTTTGCTGGAAAAAGATGTTATGGTTGAGGAACAATACGCGGCTGCCATGGTACATAGAAGCA
ATGTTGCTAAGACCGCAAGCGCGATTGCAAAGGTAAGCTCTGCTTTCATGGGCTTTCCGGGACCTAAAATATCTCCCGAT
AAGCAGAGGCAAACCGTGAGTATAATAACAACGCAGGAGAATGCGTATAATGCGTAA

Upstream 100 bases:

>100_bases
TGTTGTTGAGATTTGCCCGTGTCTTATCGTGAAAGCTGATTCTGGCCCAAAAGAGTAGTGTTTGTTTAAGAGGGGCCTTT
TATAGGCCCTCTTTTTATTT

Downstream 100 bases:

>100_bases
GGGTTGCGCATAGTATGCGGGCTCAGTTTGTCTAGTAATTGCTCTTTTGAGCGGTTGTTGCACTTGTAATTGTCGAAGTC
CTTAGGACTAATTGTTTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MVQRGYHDAVTSYTGRPLTFSWLHSYSSVLTAGLLEKDVMVEEQYAAAMVHRSNVAKTASAIAKVSSAFMGFPGPKISPD
KQRQTVSIITTQENAYNA

Sequences:

>Translated_98_residues
MVQRGYHDAVTSYTGRPLTFSWLHSYSSVLTAGLLEKDVMVEEQYAAAMVHRSNVAKTASAIAKVSSAFMGFPGPKISPD
KQRQTVSIITTQENAYNA
>Mature_98_residues
MVQRGYHDAVTSYTGRPLTFSWLHSYSSVLTAGLLEKDVMVEEQYAAAMVHRSNVAKTASAIAKVSSAFMGFPGPKISPD
KQRQTVSIITTQENAYNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10712; Mature: 10712

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQRGYHDAVTSYTGRPLTFSWLHSYSSVLTAGLLEKDVMVEEQYAAAMVHRSNVAKTAS
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAKVSSAFMGFPGPKISPDKQRQTVSIITTQENAYNA
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MVQRGYHDAVTSYTGRPLTFSWLHSYSSVLTAGLLEKDVMVEEQYAAAMVHRSNVAKTAS
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAKVSSAFMGFPGPKISPDKQRQTVSIITTQENAYNA
HHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA