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The map label for this gene is ycaI [C]

Identifier: 88608712

GI number: 88608712

Start: 260324

End: 262534

Strand: Reverse

Name: ycaI [C]

Synonym: NSE_0317

Alternate gene names: 88608712

Gene position: 262534-260324 (Counterclockwise)

Preceding gene: 88608020

Following gene: 88608793

Centisome position: 30.56

GC content: 38.44

Gene sequence:

>2211_bases
TTGAGTACAAAGAATCAAACAAAGCTCTTTGTATGGATCCCCTTCCTGTTAAGTATCGGGATTATACTTTTCTTTGAAGC
TACTTTTTACCCAAGACCGCATCATTTGGTACTCACAATATTTGGGCTAGGGCTACAGTTATTCTTAGCTTATATAGCTA
AAAAAGCCAGAACCGTAACACTGATATGTGTCATAATTTCCGCGGGATTTATTATCGCAGAAATTCGAACGCTGGTTTCC
TATACAGAAATGATCAAAACGCCCCAATACATTCAAAACGCAACAGGCATGGTGCAAAGTCTTTCACACAAAAAATCTGG
AATGCTAATCACGGTGAAGCACGCTGGAAGTTCTTTAAAACTCCATTCGACAAAAAGTCTAACAGATCTACACTCGGGCG
ATATAGTAAACTTTTCCGCGTACCTATTACCAGTACAAGGTGCGGCAACACCATCAGGCTATGACTTTGCCATGTTTCAA
TATTTTAGCGGTGTAAGGGCTACAGGAAGACTAGTCGGAGAAATCACGGTAGTAAAACCAACAAGTCACCAATCTATTTT
TCCACGTATCAGAAAAGTCATTCATGAAAAATTCAAATACAACTTGGCGGAAATACCTTCTGAAATAGCTCTAGCACTCA
CAATAGGTAAAAGAGATGGAATAGATCCAAAAATAAATGAGTTATTTAGAAAATCAGGAACATCTCATTTGTTAGCAATT
TCTGGATTACATATGGGATTAGTAGGATTATTTTTCTTTTCCCTTCTGAGAAGATCTTGTACGTTTTCTACACACCTAAC
ACTCAGGTACGACATCAAAAAGCTTTCTGTTATCGCTGGAATAGCATCGAGTATTTTTTATTTACAACTCTCTGGAATGC
AGACATCTGCTCAGAGAGCTTGCATAATGATATGTACTTTTTTCCTTTCAATACTGCTGGATAAAAAACCAGATACATTA
CGTTCTATCATCTTTGCAGCGACCGTTTTAATCGTTTTATATCCCGAGAACATATTCAAACCGGGCTTTCAAATGTCATT
CTTTGCTGTACTTGGAATATGCTCATGTAACAGAAGGTCATCCCCGTACATACATACAGAATTTGCTCCTCTCTTTAAAA
TAGGAAAGTCAAAATTCGACATTAAGGAGTTAACAGCAGTAATACAACCTGAAATGACACTGATCCCACAATCAAAACAT
CAGACCAAACCTAGCAACAATACTACGCGACGATCTTTTCTCTCTTTACACAAATTCTCCACCGATTCAGTTCACAAAGG
CAAAATAAAATCGTTCTGTAAGAGCATACTTAAACCGTTCACATGCCTATTGGGGATAATAAAAACCTCGATTTTTGCGA
CTGCTGCCACTGCCCCTTTCATTTCATATCACTTTCACTATCTTTCTGTGATTGGAGTGGCTGCAAACGCTATAGCAATA
CCGTTCACATCTTTCTTAGTCATACCGACACTTGCCGGAATACTGCTCCTCATGCCTTTATATGATTCCGAGCTTTTATA
TGCCCTCCTTTCAACTGAAATAAAAATATTACTAAGCCTCATGGAATCGTTTAGCCACTTAAACCTAGGCTACTTCAACG
TGCAGGGCTTTTCCGGAACAACGTTGCTTGTAATGGTCACCGGAACCTTATCGCTTCTTATAGGTACAACATGGAAGCGA
TACCTGGGTATAATGCCCATTGCGATGGGAATTGCGATGATAAAATTCTCGCCACTACCAGATATCTTCATCTCAGAGAA
GAATATCGCGATACGATCACAAGACAACAACCTATACTTTCTTAATGCGTCAAGAGTTCCACAAAATTTCATCGCAAAGA
AATGGCTGCAGTATTCAGGATGCAAGGCAAGCAAAATATCTAACATACCTAATAGCGAAATAGAAAAACGGGAAAACTCG
TACGTGTGTACAAAAAATGGCAAAACAATCACCATCACTTTTACAAAGGACGCAAAAAACAGAACACATAACAACTTTTC
TGTGCACATGAATGGACCAATAGTAGATAACAAAAGAACATGTTCCTCACTAGAAATAGTAGAAAATCAAAATACGTTTA
TCTCTATGCAGAACAATGGAATAAAAACGACAAGGGGAAGAAATTGGCCACAAGAGATTCTCGCATCGAAACCACATTAC
AGCGATCAGTACAGTAGATGTCCAATAAACCCTGTACAGAGCTATAATTAG

Upstream 100 bases:

>100_bases
TTATCACCTGAAATCTACTATGAAACTACCATGACAACTATCGCTATTTCTGAATAGATACAACAAAATGGTTAATACCA
ATATTATTTAGAAATAAATT

Downstream 100 bases:

>100_bases
CGCATGTAAACAAGGTATATTCGAATATATGGCTTAAACCACTCTCCCCATAAAAGGCGAGAAGTTATACCACTACACCC
CCTGGAATAATACTTTGATC

Product: ComEC/Rec2 family protein

Products: NA

Alternate protein names: ComEC/Rec2-Related Protein; Competence Protein; ComEC/Rec2 Family Protein; DNA Uptake Protein; ComEC/Rec2-Like Protein; DNA Internalization-Like Competence; DNA Translocation Competence Protein ComA; Comec/Rec2-Related Protein; Competence Related Membrane Protein; Transporter DNA Uptake Transmembrane Protein; Competence Family Protein; ComEC-Type Competence Protein; Competence Membrane Protein; Competence-Related Protein; Metallo-Beta-Lactamase Superfamily Hydrolase; DNA Translocation Competence Protein; DNA Translocation Competence; Competence; Competence Protein ComEC-Like; Competence Locus E; Competence Related Protein; DNA Internalization-Related Competence Protein; ComE Operon; Metallo-Beta-Lactamase Superfamily Protein; DNA Internalization-Related Competence Protein ComEC; DNA Uptake/Competence Protein; Transmembrane DNA Uptake Competence-Related Protein; DNA Uptake Protein ComEC; TRANSPORTER DNA Internalization/Competence Family; ComEc/Rec2-Like Protein; ComEC-Like Cytoplasmic Membrane Protein; InteRNAlization-Related Competence; Competence Protein ComEC

Number of amino acids: Translated: 736; Mature: 735

Protein sequence:

>736_residues
MSTKNQTKLFVWIPFLLSIGIILFFEATFYPRPHHLVLTIFGLGLQLFLAYIAKKARTVTLICVIISAGFIIAEIRTLVS
YTEMIKTPQYIQNATGMVQSLSHKKSGMLITVKHAGSSLKLHSTKSLTDLHSGDIVNFSAYLLPVQGAATPSGYDFAMFQ
YFSGVRATGRLVGEITVVKPTSHQSIFPRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAI
SGLHMGLVGLFFFSLLRRSCTFSTHLTLRYDIKKLSVIAGIASSIFYLQLSGMQTSAQRACIMICTFFLSILLDKKPDTL
RSIIFAATVLIVLYPENIFKPGFQMSFFAVLGICSCNRRSSPYIHTEFAPLFKIGKSKFDIKELTAVIQPEMTLIPQSKH
QTKPSNNTTRRSFLSLHKFSTDSVHKGKIKSFCKSILKPFTCLLGIIKTSIFATAATAPFISYHFHYLSVIGVAANAIAI
PFTSFLVIPTLAGILLLMPLYDSELLYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKR
YLGIMPIAMGIAMIKFSPLPDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKWLQYSGCKASKISNIPNSEIEKRENS
YVCTKNGKTITITFTKDAKNRTHNNFSVHMNGPIVDNKRTCSSLEIVENQNTFISMQNNGIKTTRGRNWPQEILASKPHY
SDQYSRCPINPVQSYN

Sequences:

>Translated_736_residues
MSTKNQTKLFVWIPFLLSIGIILFFEATFYPRPHHLVLTIFGLGLQLFLAYIAKKARTVTLICVIISAGFIIAEIRTLVS
YTEMIKTPQYIQNATGMVQSLSHKKSGMLITVKHAGSSLKLHSTKSLTDLHSGDIVNFSAYLLPVQGAATPSGYDFAMFQ
YFSGVRATGRLVGEITVVKPTSHQSIFPRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAI
SGLHMGLVGLFFFSLLRRSCTFSTHLTLRYDIKKLSVIAGIASSIFYLQLSGMQTSAQRACIMICTFFLSILLDKKPDTL
RSIIFAATVLIVLYPENIFKPGFQMSFFAVLGICSCNRRSSPYIHTEFAPLFKIGKSKFDIKELTAVIQPEMTLIPQSKH
QTKPSNNTTRRSFLSLHKFSTDSVHKGKIKSFCKSILKPFTCLLGIIKTSIFATAATAPFISYHFHYLSVIGVAANAIAI
PFTSFLVIPTLAGILLLMPLYDSELLYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKR
YLGIMPIAMGIAMIKFSPLPDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKWLQYSGCKASKISNIPNSEIEKRENS
YVCTKNGKTITITFTKDAKNRTHNNFSVHMNGPIVDNKRTCSSLEIVENQNTFISMQNNGIKTTRGRNWPQEILASKPHY
SDQYSRCPINPVQSYN
>Mature_735_residues
STKNQTKLFVWIPFLLSIGIILFFEATFYPRPHHLVLTIFGLGLQLFLAYIAKKARTVTLICVIISAGFIIAEIRTLVSY
TEMIKTPQYIQNATGMVQSLSHKKSGMLITVKHAGSSLKLHSTKSLTDLHSGDIVNFSAYLLPVQGAATPSGYDFAMFQY
FSGVRATGRLVGEITVVKPTSHQSIFPRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAIS
GLHMGLVGLFFFSLLRRSCTFSTHLTLRYDIKKLSVIAGIASSIFYLQLSGMQTSAQRACIMICTFFLSILLDKKPDTLR
SIIFAATVLIVLYPENIFKPGFQMSFFAVLGICSCNRRSSPYIHTEFAPLFKIGKSKFDIKELTAVIQPEMTLIPQSKHQ
TKPSNNTTRRSFLSLHKFSTDSVHKGKIKSFCKSILKPFTCLLGIIKTSIFATAATAPFISYHFHYLSVIGVAANAIAIP
FTSFLVIPTLAGILLLMPLYDSELLYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGTTLLVMVTGTLSLLIGTTWKRY
LGIMPIAMGIAMIKFSPLPDIFISEKNIAIRSQDNNLYFLNASRVPQNFIAKKWLQYSGCKASKISNIPNSEIEKRENSY
VCTKNGKTITITFTKDAKNRTHNNFSVHMNGPIVDNKRTCSSLEIVENQNTFISMQNNGIKTTRGRNWPQEILASKPHYS
DQYSRCPINPVQSYN

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081801, Length=207, Percent_Identity=25.6038647342995, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82231; Mature: 82099

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKNQTKLFVWIPFLLSIGIILFFEATFYPRPHHLVLTIFGLGLQLFLAYIAKKARTVT
CCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHH
LICVIISAGFIIAEIRTLVSYTEMIKTPQYIQNATGMVQSLSHKKSGMLITVKHAGSSLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEE
LHSTKSLTDLHSGDIVNFSAYLLPVQGAATPSGYDFAMFQYFSGVRATGRLVGEITVVKP
EECCCCHHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECC
TSHQSIFPRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAI
CCCHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEE
SGLHMGLVGLFFFSLLRRSCTFSTHLTLRYDIKKLSVIAGIASSIFYLQLSGMQTSAQRA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHEEEEEECCCCCHHHHH
CIMICTFFLSILLDKKPDTLRSIIFAATVLIVLYPENIFKPGFQMSFFAVLGICSCNRRS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCHHHCCCCCCHHHHHHHHHHCCCCCC
SPYIHTEFAPLFKIGKSKFDIKELTAVIQPEMTLIPQSKHQTKPSNNTTRRSFLSLHKFS
CCEEEECCHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
TDSVHKGKIKSFCKSILKPFTCLLGIIKTSIFATAATAPFISYHFHYLSVIGVAANAIAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
PFTSFLVIPTLAGILLLMPLYDSELLYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
TLLVMVTGTLSLLIGTTWKRYLGIMPIAMGIAMIKFSPLPDIFISEKNIAIRSQDNNLYF
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCEEEEECCCCEEE
LNASRVPQNFIAKKWLQYSGCKASKISNIPNSEIEKRENSYVCTKNGKTITITFTKDAKN
EECCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCEEEECCCCEEEEEEECCCCC
RTHNNFSVHMNGPIVDNKRTCSSLEIVENQNTFISMQNNGIKTTRGRNWPQEILASKPHY
CCCCCEEEEECCCEECCCCCCCCEEEEECCCCEEEEECCCEECCCCCCCHHHHHCCCCCC
SDQYSRCPINPVQSYN
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STKNQTKLFVWIPFLLSIGIILFFEATFYPRPHHLVLTIFGLGLQLFLAYIAKKARTVT
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHH
LICVIISAGFIIAEIRTLVSYTEMIKTPQYIQNATGMVQSLSHKKSGMLITVKHAGSSLK
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEE
LHSTKSLTDLHSGDIVNFSAYLLPVQGAATPSGYDFAMFQYFSGVRATGRLVGEITVVKP
EECCCCHHHCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEECC
TSHQSIFPRIRKVIHEKFKYNLAEIPSEIALALTIGKRDGIDPKINELFRKSGTSHLLAI
CCCHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEE
SGLHMGLVGLFFFSLLRRSCTFSTHLTLRYDIKKLSVIAGIASSIFYLQLSGMQTSAQRA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHEEEEEECCCCCHHHHH
CIMICTFFLSILLDKKPDTLRSIIFAATVLIVLYPENIFKPGFQMSFFAVLGICSCNRRS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCHHHCCCCCCHHHHHHHHHHCCCCCC
SPYIHTEFAPLFKIGKSKFDIKELTAVIQPEMTLIPQSKHQTKPSNNTTRRSFLSLHKFS
CCEEEECCHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCC
TDSVHKGKIKSFCKSILKPFTCLLGIIKTSIFATAATAPFISYHFHYLSVIGVAANAIAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
PFTSFLVIPTLAGILLLMPLYDSELLYALLSTEIKILLSLMESFSHLNLGYFNVQGFSGT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
TLLVMVTGTLSLLIGTTWKRYLGIMPIAMGIAMIKFSPLPDIFISEKNIAIRSQDNNLYF
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCEEEEECCCCEEE
LNASRVPQNFIAKKWLQYSGCKASKISNIPNSEIEKRENSYVCTKNGKTITITFTKDAKN
EECCCCCHHHHHHHHHHHCCCCHHHCCCCCCHHHHHCCCCEEEECCCCEEEEEEECCCCC
RTHNNFSVHMNGPIVDNKRTCSSLEIVENQNTFISMQNNGIKTTRGRNWPQEILASKPHY
CCCCCEEEEECCCEECCCCCCCCEEEEECCCCEEEEECCCEECCCCCCCHHHHHCCCCCC
SDQYSRCPINPVQSYN
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA