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The map label for this gene is recR

Identifier: 88608709

GI number: 88608709

Start: 801342

End: 801932

Strand: Reverse

Name: recR

Synonym: NSE_0899

Alternate gene names: 88608709

Gene position: 801932-801342 (Counterclockwise)

Preceding gene: 88608207

Following gene: 88608843

Centisome position: 93.36

GC content: 41.29

Gene sequence:

>591_bases
ATGGACAAGAAGATAAAAGCTCTAATAAAACTCGCTGAAAATTTACCAGGATTGGGACCCAAGTCAGCTAGGAGAATAGT
CTTGCATTTATTGAAATCGAGGGAGACAACTTTAATTCGGTTTATCGATACGATGCAGCTTCTTTATGAGACTATCAAGC
ACTGTGAGCTGTGCGGAAATCTTGAAAGTGAATCACCGTGTTCAATTTGTAGAAGCACTAAAAGAAGCTCAGATATTGTA
TGCGTAGTCGAAGAGATTACTGATCTCTGGGCAATAGAAAAGGCCGGGGTACATAATGGAAGATATCATGTGCTAAATGG
TGCATTATCCATTGTGGATGGTATTACTCCAGAAACGTTACAGATAGAAAAGTTAAAACGGAGAGTTTCTTCCGGAGCTG
TAAAAGAGCTGATCATTGCTACCAACGCGACTGTAGAGGGTCAGACGACAGCACAATACATAGTCGAGGTTTTAAAAGGT
ACACAGGTAAAATTGTCGTTTTTAGCGCATGGCATACCTGTGGGCAGTGAGATGGATTATCTAGATGAGGGAACGCTAGG
AATAGCATTCGCGAATCGGAGAGCTGTATAA

Upstream 100 bases:

>100_bases
TAAGCCGCACAGAAACAACTTATAAGACATACACAAACACAGAATGTGCGCAGACGCAAAACCCGGATATCATTATACAC
GCGATTGAACGATAAAGTTA

Downstream 100 bases:

>100_bases
GTTGTGTTGATATATAGATGCGCAATATCTAGGCCTTGGCCTGTGAGGCTGTACTTTACTTTTTTTGAGTCAGGATTTAC
AATCTTGTCCAGTGGTGTCG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDKKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLESESPCSICRSTKRSSDIV
CVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQIEKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKG
TQVKLSFLAHGIPVGSEMDYLDEGTLGIAFANRRAV

Sequences:

>Translated_196_residues
MDKKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLESESPCSICRSTKRSSDIV
CVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQIEKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKG
TQVKLSFLAHGIPVGSEMDYLDEGTLGIAFANRRAV
>Mature_196_residues
MDKKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGNLESESPCSICRSTKRSSDIV
CVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETLQIEKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKG
TQVKLSFLAHGIPVGSEMDYLDEGTLGIAFANRRAV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=183, Percent_Identity=38.7978142076503, Blast_Score=144, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_NEOSM (Q2GCN1)

Other databases:

- EMBL:   CP000237
- RefSeq:   YP_506765.1
- ProteinModelPortal:   Q2GCN1
- SMR:   Q2GCN1
- STRING:   Q2GCN1
- GeneID:   3931543
- GenomeReviews:   CP000237_GR
- KEGG:   nse:NSE_0899
- TIGR:   NSE_0899
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q2GCN1
- ProtClustDB:   CLSK2528095
- BioCyc:   NSEN222891:NSE_0899-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21556; Mature: 21556

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGN
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LESESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETL
CCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCHH
QIEKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGTQVKLSFLAHGIPVGSEMDY
HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCC
LDEGTLGIAFANRRAV
CCCCCEEEEECCCCCC
>Mature Secondary Structure
MDKKIKALIKLAENLPGLGPKSARRIVLHLLKSRETTLIRFIDTMQLLYETIKHCELCGN
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
LESESPCSICRSTKRSSDIVCVVEEITDLWAIEKAGVHNGRYHVLNGALSIVDGITPETL
CCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCCCHH
QIEKLKRRVSSGAVKELIIATNATVEGQTTAQYIVEVLKGTQVKLSFLAHGIPVGSEMDY
HHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCC
LDEGTLGIAFANRRAV
CCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA