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The map label for this gene is 88608659

Identifier: 88608659

GI number: 88608659

Start: 809558

End: 810904

Strand: Reverse

Name: 88608659

Synonym: NSE_0913

Alternate gene names: NA

Gene position: 810904-809558 (Counterclockwise)

Preceding gene: 88608715

Following gene: 88608017

Centisome position: 94.4

GC content: 39.94

Gene sequence:

>1347_bases
ATGCTTAGGGGTATTATCTTCGTTTTATTTTTCTTAGTGTGTGGGTTTTCTCATGCAGTTGATAGTCAGACCTTATTCAA
GATTACAGAAGTTGAGAGTAAGTATGGTGTGAGAGCGTGGTTTGTTCCCAAAAATAATGTTCCATTGGTCTTTTATAGTT
TTGTGTTCAAAGGGGGAGGTTATGCATATGATCCAAAAGCAAAACTCGGGTTGGCAGCTCTCATCGTGGAAGTTCTTAAC
GAAGGTATTAGTGGTACAACTAACAGAGATTTTGAAAAAAGTCTCGAAAAAATAGGTGGTAAAATAGTATATGACCTTGG
AGCAGATAACCTTGTAGTCACTGTGAGTGCTCCGAAGGAATCTATAAAACAGGCGATTGAGCTTTTTTGTGCGTCAGTAG
CAAAACCAAAATTGGATGATGAGACTCTGTCAAAAGTGAAAGGTAGACACATTTCACAACTTAAGAGGGATAAAGGTGAT
CCAGTGTCTATTGCTAAGACAGAATTTTTCAAGGTTGTGTTTCCAGATTCGGGCTATTCAAACGTGCGTTGGGGACGCGT
TGAAACGGTCGATGCAATAAAAGCTGATGATATAAAGGCGAAAATCGTCAATGTTTTTAACAGAATCAACATGAGCATTG
CGGTTCTTGGAAACACGCATGCTGATGATATTAAGTCCGTGTTGGACGATTACCTCATAGAGTTCCCTCTAACGATGATG
GAGGTCAAAAAGCCTGAACAACCTGTCTTTCGTACCTCAGGTGAATGTATTTCGGTTGAAAAAAACATTCCACAGAATGT
TATTTTGTTTGGGCACAGTGGGCTGAGTCCAACAGATGAGGACTTCTACAACCTGGTAGTATTAAACCACATTCTTGGAG
GTCCTGGGCTTGAATCGTTGTTGATGCAGGAAATTCGTGAACGCAAGGGTTATACGTATGGTATATATACAAAGCTATGG
CACTCGGCGGTTAATTTCTTGTTCGGCTTTGCTACAACAAGCAATGATAATGCTCCGCAAGTAAGGGAGGGCATATTAAC
CGTATTGAACGAGCTAAAGCGTTCAGGGTTAACTTCTGCGAGGGTTGAGGAAGCTAAAAGCCATTTAGTTAATATGTTTG
TCCTGAAAATGGATAAGTCGACTAATATGTTAGGTATGCTCGTGCAGATGCAACAGGAAGGTTTGGGGATCGATTACGTA
GAAAAGTATTTAGAAGGAATACGTAGGGTAAAGGTCGAAAATCTAAACTTATTTATAAAGAGCTTTTTGAATCCTCAGTC
TGTACTTTTTGTTAATGTTGGCGCAATAGTTTCACCAATTACTGGTGCGAAGGTTTGTCCAAAGTAA

Upstream 100 bases:

>100_bases
TGGCAGAACGCGTATCAGCTGTAACGCCGGAACAAATTAACAGTGCGATTATGCAATTGATGAATGCAAAGAAAGTAATA
GGGTACTTAGATAAATAGAT

Downstream 100 bases:

>100_bases
TAGAAAGTTGAAGGTGTTTGAGACTTTTGTTGTATACGTGGATGAGCGTGGCTCTTATGATACGCAGTGTGTTAATCGCG
TTAATTTAACAGGGGTTCTA

Product: M16 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MLRGIIFVLFFLVCGFSHAVDSQTLFKITEVESKYGVRAWFVPKNNVPLVFYSFVFKGGGYAYDPKAKLGLAALIVEVLN
EGISGTTNRDFEKSLEKIGGKIVYDLGADNLVVTVSAPKESIKQAIELFCASVAKPKLDDETLSKVKGRHISQLKRDKGD
PVSIAKTEFFKVVFPDSGYSNVRWGRVETVDAIKADDIKAKIVNVFNRINMSIAVLGNTHADDIKSVLDDYLIEFPLTMM
EVKKPEQPVFRTSGECISVEKNIPQNVILFGHSGLSPTDEDFYNLVVLNHILGGPGLESLLMQEIRERKGYTYGIYTKLW
HSAVNFLFGFATTSNDNAPQVREGILTVLNELKRSGLTSARVEEAKSHLVNMFVLKMDKSTNMLGMLVQMQQEGLGIDYV
EKYLEGIRRVKVENLNLFIKSFLNPQSVLFVNVGAIVSPITGAKVCPK

Sequences:

>Translated_448_residues
MLRGIIFVLFFLVCGFSHAVDSQTLFKITEVESKYGVRAWFVPKNNVPLVFYSFVFKGGGYAYDPKAKLGLAALIVEVLN
EGISGTTNRDFEKSLEKIGGKIVYDLGADNLVVTVSAPKESIKQAIELFCASVAKPKLDDETLSKVKGRHISQLKRDKGD
PVSIAKTEFFKVVFPDSGYSNVRWGRVETVDAIKADDIKAKIVNVFNRINMSIAVLGNTHADDIKSVLDDYLIEFPLTMM
EVKKPEQPVFRTSGECISVEKNIPQNVILFGHSGLSPTDEDFYNLVVLNHILGGPGLESLLMQEIRERKGYTYGIYTKLW
HSAVNFLFGFATTSNDNAPQVREGILTVLNELKRSGLTSARVEEAKSHLVNMFVLKMDKSTNMLGMLVQMQQEGLGIDYV
EKYLEGIRRVKVENLNLFIKSFLNPQSVLFVNVGAIVSPITGAKVCPK
>Mature_448_residues
MLRGIIFVLFFLVCGFSHAVDSQTLFKITEVESKYGVRAWFVPKNNVPLVFYSFVFKGGGYAYDPKAKLGLAALIVEVLN
EGISGTTNRDFEKSLEKIGGKIVYDLGADNLVVTVSAPKESIKQAIELFCASVAKPKLDDETLSKVKGRHISQLKRDKGD
PVSIAKTEFFKVVFPDSGYSNVRWGRVETVDAIKADDIKAKIVNVFNRINMSIAVLGNTHADDIKSVLDDYLIEFPLTMM
EVKKPEQPVFRTSGECISVEKNIPQNVILFGHSGLSPTDEDFYNLVVLNHILGGPGLESLLMQEIRERKGYTYGIYTKLW
HSAVNFLFGFATTSNDNAPQVREGILTVLNELKRSGLTSARVEEAKSHLVNMFVLKMDKSTNMLGMLVQMQQEGLGIDYV
EKYLEGIRRVKVENLNLFIKSFLNPQSVLFVNVGAIVSPITGAKVCPK

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 49809; Mature: 49809

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIIFVLFFLVCGFSHAVDSQTLFKITEVESKYGVRAWFVPKNNVPLVFYSFVFKGGG
CHHHHHHHHHHHHHCCHHHCCCHHHHEEEHHHHCCCCEEEEECCCCCCEEEEEHHHCCCC
YAYDPKAKLGLAALIVEVLNEGISGTTNRDFEKSLEKIGGKIVYDLGADNLVVTVSAPKE
EEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCHH
SIKQAIELFCASVAKPKLDDETLSKVKGRHISQLKRDKGDPVSIAKTEFFKVVFPDSGYS
HHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCC
NVRWGRVETVDAIKADDIKAKIVNVFNRINMSIAVLGNTHADDIKSVLDDYLIEFPLTMM
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCHHHH
EVKKPEQPVFRTSGECISVEKNIPQNVILFGHSGLSPTDEDFYNLVVLNHILGGPGLESL
HCCCCCCCCHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHH
LMQEIRERKGYTYGIYTKLWHSAVNFLFGFATTSNDNAPQVREGILTVLNELKRSGLTSA
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHH
RVEEAKSHLVNMFVLKMDKSTNMLGMLVQMQQEGLGIDYVEKYLEGIRRVKVENLNLFIK
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLNPQSVLFVNVGAIVSPITGAKVCPK
HHCCCCEEEEEECCHHHCCCCCCCCCCC
>Mature Secondary Structure
MLRGIIFVLFFLVCGFSHAVDSQTLFKITEVESKYGVRAWFVPKNNVPLVFYSFVFKGGG
CHHHHHHHHHHHHHCCHHHCCCHHHHEEEHHHHCCCCEEEEECCCCCCEEEEEHHHCCCC
YAYDPKAKLGLAALIVEVLNEGISGTTNRDFEKSLEKIGGKIVYDLGADNLVVTVSAPKE
EEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCCCEEEEEECCHH
SIKQAIELFCASVAKPKLDDETLSKVKGRHISQLKRDKGDPVSIAKTEFFKVVFPDSGYS
HHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCC
NVRWGRVETVDAIKADDIKAKIVNVFNRINMSIAVLGNTHADDIKSVLDDYLIEFPLTMM
CCCCCCCCHHHHHCCCHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCHHHH
EVKKPEQPVFRTSGECISVEKNIPQNVILFGHSGLSPTDEDFYNLVVLNHILGGPGLESL
HCCCCCCCCHHCCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHH
LMQEIRERKGYTYGIYTKLWHSAVNFLFGFATTSNDNAPQVREGILTVLNELKRSGLTSA
HHHHHHHHCCCEEEHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHH
RVEEAKSHLVNMFVLKMDKSTNMLGMLVQMQQEGLGIDYVEKYLEGIRRVKVENLNLFIK
HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFLNPQSVLFVNVGAIVSPITGAKVCPK
HHCCCCEEEEEECCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]