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The map label for this gene is 88608646

Identifier: 88608646

GI number: 88608646

Start: 379866

End: 380216

Strand: Direct

Name: 88608646

Synonym: NSE_0464

Alternate gene names: NA

Gene position: 379866-380216 (Clockwise)

Preceding gene: 88608597

Following gene: 88608468

Centisome position: 44.22

GC content: 39.6

Gene sequence:

>351_bases
TTGCAGGGGTTATCTCGCAGATCAGTAAATGATTTAGTAGGCCGTTTAGCAGAGATGATAGTGGCTCTACATCTCTCGAT
TAAGGGATATATGCTCCTGTGTAGACGTTATAGGAATCCACATTGTGAACTTGATTTAGTCTGTATCAAGCATGGAGTTT
TGCTTTTTGTAGAGGTGAAATTTCGGAGTTCGCTGCAAGTACTCGAAACCATGGTCGATTACAGCCGTATGGAAAAGATG
TATCCAGCTTCTGAGAGTTTTTGTAGTGAGTTTCAGTTGTACTACTGCCTTGAAAGAGTCTTTAAAGTCTTTCTTGTAAC
CCCTTCAGTAATACAAGTTATAACGCTATAA

Upstream 100 bases:

>100_bases
AGGAAGTCCATTCGTAAAGTACAACTTGCTATTTTCTGCGGTAGATATATCACTTCATTTATGCTGTCTTTTTAGAAAGT
AGGTTCAGTATAAGTAAATG

Downstream 100 bases:

>100_bases
GCAGCTGCGTATAGGTGCTAGCTTTTATTCATATTTTTTTGTGTGCTATCCGATTCTGGGTTGTTAGGTGAGAATTTGAA
AATTTCGCAATTTCTCTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MQGLSRRSVNDLVGRLAEMIVALHLSIKGYMLLCRRYRNPHCELDLVCIKHGVLLFVEVKFRSSLQVLETMVDYSRMEKM
YPASESFCSEFQLYYCLERVFKVFLVTPSVIQVITL

Sequences:

>Translated_116_residues
MQGLSRRSVNDLVGRLAEMIVALHLSIKGYMLLCRRYRNPHCELDLVCIKHGVLLFVEVKFRSSLQVLETMVDYSRMEKM
YPASESFCSEFQLYYCLERVFKVFLVTPSVIQVITL
>Mature_116_residues
MQGLSRRSVNDLVGRLAEMIVALHLSIKGYMLLCRRYRNPHCELDLVCIKHGVLLFVEVKFRSSLQVLETMVDYSRMEKM
YPASESFCSEFQLYYCLERVFKVFLVTPSVIQVITL

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13544; Mature: 13544

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGLSRRSVNDLVGRLAEMIVALHLSIKGYMLLCRRYRNPHCELDLVCIKHGVLLFVEVK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCEEEEEEEH
FRSSLQVLETMVDYSRMEKMYPASESFCSEFQLYYCLERVFKVFLVTPSVIQVITL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure
MQGLSRRSVNDLVGRLAEMIVALHLSIKGYMLLCRRYRNPHCELDLVCIKHGVLLFVEVK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHEECCCEEEEEEEH
FRSSLQVLETMVDYSRMEKMYPASESFCSEFQLYYCLERVFKVFLVTPSVIQVITL
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA