Click here to switch to the map view.

The map label for this gene is 88608614

Identifier: 88608614

GI number: 88608614

Start: 205891

End: 207426

Strand: Reverse

Name: 88608614

Synonym: NSE_0242

Alternate gene names: NA

Gene position: 207426-205891 (Counterclockwise)

Preceding gene: 88608275

Following gene: 88608317

Centisome position: 24.15

GC content: 45.64

Gene sequence:

>1536_bases
ATGTATAAACTTAGCAAGATATTACTTTTGACGACGGCACTAGCCAGCGTCGCAGGCGCGTCCGAGGTGCCTTTGACAGA
GGATCAAGTTCCGGCTGTTGAGAAGACGACATCGAATAAACCATGTGTCTGCAATAAAGCAGGCCCTAATCAGGTCAAGG
CCCGATTGAGTAAATTTGCGGACCATTGTGCAACTGGTATGGGCTCGCGTGGATGCAGTTGTGATGGTTCGTCTGACCTA
AATGGGACCAGTAACTGCGATGCAGTGAATTTCGTGTTCAAAGTAAAGGGTAGTAACGATTTCTCGTTCGGTTACGCGAG
CAATCAGGACTTCTTCAAGTTAGCGAAAGGTCTTCCAAAAATCGATGTCCTTGTAGATGCAAGCGGTAAAGATATTGAAA
GCTCATACAATGGAGATAGTAGCACTAGTGGTACTGTGAACGGCGTTAAGGCCCTTTCTGATGGTGGCGTTCTAGGTGAT
TACACACGTAGCACTGATTTGTTCAACGAGCACAAGTTATCAATAGAAGCTAGACGTACACTAGGCAGCTTCGCTTATGG
TGGTTTGCTAGAAGCAGAATTTAGTAGGAAAGATGCGGTTAGTGCCGATAATGCATACGTTTTCTTTGAAACCGGTTACG
GAAGATTTGAAATGGGCCGCATCACTGACAGTGCTGTGGAACCGCTCAGGATTGATGCATCTTCCATCGCTGCTGTTGGT
GGTGGTTTTGGTGATCTAAATTGGACGACGCTAGCTAACCTTGAAGGACGCCCTATAGGTGCTACGCATAGCACAACAGG
GAATGGTGATAGCCAGAAGAGCAGCAGCACGCGTCATAGGGATGCACAGCGCCCTTTCTTGGTGCATGCAAACTACTATA
CCGCATATAACAATCCACTAAGGGCTAACTTCATTACTACTGGGCTGGGCAATTTGCGGATGGCATTGGGTTATACGAAC
TCTACTGCGGATGGTACATACCATGATATTATTGATGTAGGTGCTGGCTATGCTGGGAAGAAAGGAAATCTGAAGTATGC
TATTTCCTTCAGTGGTCAGGCTGGTCTCAGCACTCCAACTGGTGATGAACATCACCCTCTCAGACGTTTTGAAGTCGGTG
CATCGGTTCAGCTTCACACTATAAAGCTTGCTGGATCATGGGGTAGTACGTATCTCTCTGGAGTTAAAAAATCGAAGGAT
ATGCAACTTGATTTAACTAAGGCTTTTGCTGATAGCAGTCAACTCAAAAAAACAGACGGTGATAGTACTTACATGACTTT
CGGTGCTACATATGAAGAAGGTCCTGTGATGTTTAGCCTTGGCTATATGGAGAGTTATAATACCTTCGTTAAAAGTGTCG
GAGTGAATACGCTAAGAGTTGTTTCCCTTGGTACGCATTATCGCATCACTGGAAGCACGTACGAGCTTACGCCTTACATT
AACACCAAGTGTTTCATGGCTCAGGAAGCTGGGATTAAGGCTGAGGACAACAACAAAGGTTTTGTTCTTGCTTCCGGTGT
GAAGGTATCGTACTAA

Upstream 100 bases:

>100_bases
TATCCATGTAACATTCGGAGAGAAGGGTTCGCTATTTATCACGCTCGTAGAGGCATGACCTGGATGGAAACGTTTTTATG
TTATTTTTTACTAGAAGCTT

Downstream 100 bases:

>100_bases
TTTAAGTTTTCATCATATGGAGACGAGGCCCGCAAACAAATATTATCTTGCGGGTCCTGTCTTTCATGTTGTTTTCACCT
TGCTTTTCCTTTGCTTTTCA

Product: 51 kDa major antigen

Products: NA

Alternate protein names: 51 KDa Antigen

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MYKLSKILLLTTALASVAGASEVPLTEDQVPAVEKTTSNKPCVCNKAGPNQVKARLSKFADHCATGMGSRGCSCDGSSDL
NGTSNCDAVNFVFKVKGSNDFSFGYASNQDFFKLAKGLPKIDVLVDASGKDIESSYNGDSSTSGTVNGVKALSDGGVLGD
YTRSTDLFNEHKLSIEARRTLGSFAYGGLLEAEFSRKDAVSADNAYVFFETGYGRFEMGRITDSAVEPLRIDASSIAAVG
GGFGDLNWTTLANLEGRPIGATHSTTGNGDSQKSSSTRHRDAQRPFLVHANYYTAYNNPLRANFITTGLGNLRMALGYTN
STADGTYHDIIDVGAGYAGKKGNLKYAISFSGQAGLSTPTGDEHHPLRRFEVGASVQLHTIKLAGSWGSTYLSGVKKSKD
MQLDLTKAFADSSQLKKTDGDSTYMTFGATYEEGPVMFSLGYMESYNTFVKSVGVNTLRVVSLGTHYRITGSTYELTPYI
NTKCFMAQEAGIKAEDNNKGFVLASGVKVSY

Sequences:

>Translated_511_residues
MYKLSKILLLTTALASVAGASEVPLTEDQVPAVEKTTSNKPCVCNKAGPNQVKARLSKFADHCATGMGSRGCSCDGSSDL
NGTSNCDAVNFVFKVKGSNDFSFGYASNQDFFKLAKGLPKIDVLVDASGKDIESSYNGDSSTSGTVNGVKALSDGGVLGD
YTRSTDLFNEHKLSIEARRTLGSFAYGGLLEAEFSRKDAVSADNAYVFFETGYGRFEMGRITDSAVEPLRIDASSIAAVG
GGFGDLNWTTLANLEGRPIGATHSTTGNGDSQKSSSTRHRDAQRPFLVHANYYTAYNNPLRANFITTGLGNLRMALGYTN
STADGTYHDIIDVGAGYAGKKGNLKYAISFSGQAGLSTPTGDEHHPLRRFEVGASVQLHTIKLAGSWGSTYLSGVKKSKD
MQLDLTKAFADSSQLKKTDGDSTYMTFGATYEEGPVMFSLGYMESYNTFVKSVGVNTLRVVSLGTHYRITGSTYELTPYI
NTKCFMAQEAGIKAEDNNKGFVLASGVKVSY
>Mature_511_residues
MYKLSKILLLTTALASVAGASEVPLTEDQVPAVEKTTSNKPCVCNKAGPNQVKARLSKFADHCATGMGSRGCSCDGSSDL
NGTSNCDAVNFVFKVKGSNDFSFGYASNQDFFKLAKGLPKIDVLVDASGKDIESSYNGDSSTSGTVNGVKALSDGGVLGD
YTRSTDLFNEHKLSIEARRTLGSFAYGGLLEAEFSRKDAVSADNAYVFFETGYGRFEMGRITDSAVEPLRIDASSIAAVG
GGFGDLNWTTLANLEGRPIGATHSTTGNGDSQKSSSTRHRDAQRPFLVHANYYTAYNNPLRANFITTGLGNLRMALGYTN
STADGTYHDIIDVGAGYAGKKGNLKYAISFSGQAGLSTPTGDEHHPLRRFEVGASVQLHTIKLAGSWGSTYLSGVKKSKD
MQLDLTKAFADSSQLKKTDGDSTYMTFGATYEEGPVMFSLGYMESYNTFVKSVGVNTLRVVSLGTHYRITGSTYELTPYI
NTKCFMAQEAGIKAEDNNKGFVLASGVKVSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54584; Mature: 54584

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLSKILLLTTALASVAGASEVPLTEDQVPAVEKTTSNKPCVCNKAGPNQVKARLSKFA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
DHCATGMGSRGCSCDGSSDLNGTSNCDAVNFVFKVKGSNDFSFGYASNQDFFKLAKGLPK
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCHHHHHHCCCCE
IDVLVDASGKDIESSYNGDSSTSGTVNGVKALSDGGVLGDYTRSTDLFNEHKLSIEARRT
EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCEEEEEHHHH
LGSFAYGGLLEAEFSRKDAVSADNAYVFFETGYGRFEMGRITDSAVEPLRIDASSIAAVG
HHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECHHHHHHHC
GGFGDLNWTTLANLEGRPIGATHSTTGNGDSQKSSSTRHRDAQRPFLVHANYYTAYNNPL
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEECCCE
RANFITTGLGNLRMALGYTNSTADGTYHDIIDVGAGYAGKKGNLKYAISFSGQAGLSTPT
EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCC
GDEHHPLRRFEVGASVQLHTIKLAGSWGSTYLSGVKKSKDMQLDLTKAFADSSQLKKTDG
CCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEHHHHCCCHHHHCCCC
DSTYMTFGATYEEGPVMFSLGYMESYNTFVKSVGVNTLRVVSLGTHYRITGSTYELTPYI
CCEEEEECCEECCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCEEEEECCEEEECCCC
NTKCFMAQEAGIKAEDNNKGFVLASGVKVSY
CCEEEEECCCCCEECCCCCCEEEECCCEECC
>Mature Secondary Structure
MYKLSKILLLTTALASVAGASEVPLTEDQVPAVEKTTSNKPCVCNKAGPNQVKARLSKFA
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH
DHCATGMGSRGCSCDGSSDLNGTSNCDAVNFVFKVKGSNDFSFGYASNQDFFKLAKGLPK
HHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCCHHHHHHCCCCE
IDVLVDASGKDIESSYNGDSSTSGTVNGVKALSDGGVLGDYTRSTDLFNEHKLSIEARRT
EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCCCCEEEEEHHHH
LGSFAYGGLLEAEFSRKDAVSADNAYVFFETGYGRFEMGRITDSAVEPLRIDASSIAAVG
HHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEECHHHHHHHC
GGFGDLNWTTLANLEGRPIGATHSTTGNGDSQKSSSTRHRDAQRPFLVHANYYTAYNNPL
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEEEEEECCCE
RANFITTGLGNLRMALGYTNSTADGTYHDIIDVGAGYAGKKGNLKYAISFSGQAGLSTPT
EEEEEEECCCCEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCC
GDEHHPLRRFEVGASVQLHTIKLAGSWGSTYLSGVKKSKDMQLDLTKAFADSSQLKKTDG
CCCCCCCEEEECCCEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEHHHHCCCHHHHCCCC
DSTYMTFGATYEEGPVMFSLGYMESYNTFVKSVGVNTLRVVSLGTHYRITGSTYELTPYI
CCEEEEECCEECCCCEEEEECCHHHHHHHHHHCCCCEEEEEEECCEEEEECCEEEECCCC
NTKCFMAQEAGIKAEDNNKGFVLASGVKVSY
CCEEEEECCCCCEECCCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA