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The map label for this gene is 88608471

Identifier: 88608471

GI number: 88608471

Start: 821205

End: 821948

Strand: Reverse

Name: 88608471

Synonym: NSE_0926

Alternate gene names: NA

Gene position: 821948-821205 (Counterclockwise)

Preceding gene: 88608731

Following gene: 88608570

Centisome position: 95.69

GC content: 41.8

Gene sequence:

>744_bases
ATGTTGCTTTCTTTCTTTTTAGTTCCTCTTGTGTATGCATCTTTTGCGGGTGTTGTTGCGTTCGCTGTTGCACCGTTGCA
GTACCTGAAGATTATTCGGCAGGAGACAGCAGCTTCTTACTCTTCCATTTTTTTTAATGCGTTTGGAAAAAGCGGAGCGG
TGGGAGTTTTTTTCAGTGGCGTGTTTCCGTACGTTACGATGAACTTTCTTGCTAATCTTTCATTCGGTTTGAGTGACAGG
ATCTCGGAGATTGTGCTTCCAGTTCAGTACGGTATTTTGGTTGGCATCTTCGTTAGAGCGTTCCTCGGAGGAGCGATAGA
GACTGTGTTGACTATATATCCGGAAGTACGTGAGATTGTGAGGAACAAGGGAGATCTTGCCTTTGGTAAAGGTCGAGCTT
TGAGTATACTTTTCCCAGCTTTCTTGAGAAATTCGGTTGCGTGGTTAGGTGCGACTTCATCCTATGAAATTGCGACTAGG
CTTTACCTCAGCATGAACATGTCACTGCTTTTATCGATTATTCTAGGACTTGTTTTTGGTATTCTTTCTATTCCATTAGA
TGTGATGGTGACACAGAGTTGTGCTGCCAAAGAAGAATTGACATTGGTAAAGCGCGTGCTTCTGGTAGCAACTGATTCTA
GTAGTAAATTTCTTTTGGGCAGTACAATTAGGATATTACAAATCAGTATCTATACTGCTGTGACCGTTTTGACGACGTTT
ATTCTGAGATATTTCGGTATTTAA

Upstream 100 bases:

>100_bases
GTATACAATAGAAAAAATCCGCGTTGTAACGTAAGGCAAGGTTCCAAGTAGCTTGGTTTTGGTTTTCTGCAGCCTTTAGT
TAGGTCTCTAGCGTCGGCTT

Downstream 100 bases:

>100_bases
TTTAGAAGCATTCGGAAGAGTATATGTTCCTGCAACTTTATGATGTCATTTTAGGAGGAGTATTTTTCGGTTCGTTTGCT
GCAGTTGCGGCTGTGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLLSFFLVPLVYASFAGVVAFAVAPLQYLKIIRQETAASYSSIFFNAFGKSGAVGVFFSGVFPYVTMNFLANLSFGLSDR
ISEIVLPVQYGILVGIFVRAFLGGAIETVLTIYPEVREIVRNKGDLAFGKGRALSILFPAFLRNSVAWLGATSSYEIATR
LYLSMNMSLLLSIILGLVFGILSIPLDVMVTQSCAAKEELTLVKRVLLVATDSSSKFLLGSTIRILQISIYTAVTVLTTF
ILRYFGI

Sequences:

>Translated_247_residues
MLLSFFLVPLVYASFAGVVAFAVAPLQYLKIIRQETAASYSSIFFNAFGKSGAVGVFFSGVFPYVTMNFLANLSFGLSDR
ISEIVLPVQYGILVGIFVRAFLGGAIETVLTIYPEVREIVRNKGDLAFGKGRALSILFPAFLRNSVAWLGATSSYEIATR
LYLSMNMSLLLSIILGLVFGILSIPLDVMVTQSCAAKEELTLVKRVLLVATDSSSKFLLGSTIRILQISIYTAVTVLTTF
ILRYFGI
>Mature_247_residues
MLLSFFLVPLVYASFAGVVAFAVAPLQYLKIIRQETAASYSSIFFNAFGKSGAVGVFFSGVFPYVTMNFLANLSFGLSDR
ISEIVLPVQYGILVGIFVRAFLGGAIETVLTIYPEVREIVRNKGDLAFGKGRALSILFPAFLRNSVAWLGATSSYEIATR
LYLSMNMSLLLSIILGLVFGILSIPLDVMVTQSCAAKEELTLVKRVLLVATDSSSKFLLGSTIRILQISIYTAVTVLTTF
ILRYFGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26937; Mature: 26937

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSFFLVPLVYASFAGVVAFAVAPLQYLKIIRQETAASYSSIFFNAFGKSGAVGVFFSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VFPYVTMNFLANLSFGLSDRISEIVLPVQYGILVGIFVRAFLGGAIETVLTIYPEVREIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNKGDLAFGKGRALSILFPAFLRNSVAWLGATSSYEIATRLYLSMNMSLLLSIILGLVFG
HCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSIPLDVMVTQSCAAKEELTLVKRVLLVATDSSSKFLLGSTIRILQISIYTAVTVLTTF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHHHHHHHH
ILRYFGI
HHHHHCC
>Mature Secondary Structure
MLLSFFLVPLVYASFAGVVAFAVAPLQYLKIIRQETAASYSSIFFNAFGKSGAVGVFFSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VFPYVTMNFLANLSFGLSDRISEIVLPVQYGILVGIFVRAFLGGAIETVLTIYPEVREIV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNKGDLAFGKGRALSILFPAFLRNSVAWLGATSSYEIATRLYLSMNMSLLLSIILGLVFG
HCCCCEEECCCCHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSIPLDVMVTQSCAAKEELTLVKRVLLVATDSSSKFLLGSTIRILQISIYTAVTVLTTF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCHHHHHHHHHHHHHHHHHHH
ILRYFGI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA