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The map label for this gene is 88608393

Identifier: 88608393

GI number: 88608393

Start: 68745

End: 69407

Strand: Reverse

Name: 88608393

Synonym: NSE_0080

Alternate gene names: NA

Gene position: 69407-68745 (Counterclockwise)

Preceding gene: 88608158

Following gene: 88608483

Centisome position: 8.08

GC content: 46.91

Gene sequence:

>663_bases
ATGGGACGTTTTTTATCTACTGTCTTTAAACCGGTTTCTCGTTCTGCGCAAAAGTTGAGGCGGGCTATTTTACATCCAAG
TTCATCAAAGGCTGTTATCACCATAGCTGCTCTGTGGACTTGTATCCTTCTAGCGTACTGTATTCTACAAGTGCCTCGAT
ATGGGCGGATCAGGTCGTTCGGTGAATCCCTTTCTACCATTTTGCTTCCCGTCATCGGCGTAACTATTTTTTCCATTTTT
ACGCTAAGAGGCCTTCCTTCAATTAGCAAAAAGGATACCGCTATTGCAAAGAGCGTGTCGGAGCTTTACGCTCAGGGTGG
CTACCAACAATTGCATTCTGCCGCTACCGAACTGAAGGAGATCAAAAAACCTTCTCTGCAGCTCGTTGCTACTTGCGCAG
TTTCTTTTTGTGTTGCGCTCACGCTAGTAGGCGTTTTTCTTGGAGCTACGGGTGGGACAAAGGCATGCAATTTTTTTATC
TTCCTAGAAGCATCGCTCGTGATCGCAGCTTGCGCTGGCGTCGTTGGATTTTTAATGCTACATCACCAGTCCAGGGTTGC
TACAGCATTGTCTAACCTTTCAGAAGGGCAGGTCGATGTGATCGTGGATGCCGTTCGTCTTGAGCAAATAGCTACTAAAG
CTAGCACGCATCGTCGGATGTAG

Upstream 100 bases:

>100_bases
ATAGGGTAATCTTATAATAAGTAAAAGTTGACAAATTTAATAATAGTATCATATACTTGTTCTTAGCTTCTTCACCACGC
ATGGTGTTTTATTTATCGTT

Downstream 100 bases:

>100_bases
TTTCATACGGCTCAATAGGCTGCCGTACATTGCATTCGCTTGGTCTCTGTTTCAAAGTCTTGTCTTGGGTGCTAGGCAGA
GTATCTTGCCTGGCACGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MGRFLSTVFKPVSRSAQKLRRAILHPSSSKAVITIAALWTCILLAYCILQVPRYGRIRSFGESLSTILLPVIGVTIFSIF
TLRGLPSISKKDTAIAKSVSELYAQGGYQQLHSAATELKEIKKPSLQLVATCAVSFCVALTLVGVFLGATGGTKACNFFI
FLEASLVIAACAGVVGFLMLHHQSRVATALSNLSEGQVDVIVDAVRLEQIATKASTHRRM

Sequences:

>Translated_220_residues
MGRFLSTVFKPVSRSAQKLRRAILHPSSSKAVITIAALWTCILLAYCILQVPRYGRIRSFGESLSTILLPVIGVTIFSIF
TLRGLPSISKKDTAIAKSVSELYAQGGYQQLHSAATELKEIKKPSLQLVATCAVSFCVALTLVGVFLGATGGTKACNFFI
FLEASLVIAACAGVVGFLMLHHQSRVATALSNLSEGQVDVIVDAVRLEQIATKASTHRRM
>Mature_219_residues
GRFLSTVFKPVSRSAQKLRRAILHPSSSKAVITIAALWTCILLAYCILQVPRYGRIRSFGESLSTILLPVIGVTIFSIFT
LRGLPSISKKDTAIAKSVSELYAQGGYQQLHSAATELKEIKKPSLQLVATCAVSFCVALTLVGVFLGATGGTKACNFFIF
LEASLVIAACAGVVGFLMLHHQSRVATALSNLSEGQVDVIVDAVRLEQIATKASTHRRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23641; Mature: 23510

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFLSTVFKPVSRSAQKLRRAILHPSSSKAVITIAALWTCILLAYCILQVPRYGRIRSF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GESLSTILLPVIGVTIFSIFTLRGLPSISKKDTAIAKSVSELYAQGGYQQLHSAATELKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKKPSLQLVATCAVSFCVALTLVGVFLGATGGTKACNFFIFLEASLVIAACAGVVGFLML
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHQSRVATALSNLSEGQVDVIVDAVRLEQIATKASTHRRM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRFLSTVFKPVSRSAQKLRRAILHPSSSKAVITIAALWTCILLAYCILQVPRYGRIRSF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
GESLSTILLPVIGVTIFSIFTLRGLPSISKKDTAIAKSVSELYAQGGYQQLHSAATELKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKKPSLQLVATCAVSFCVALTLVGVFLGATGGTKACNFFIFLEASLVIAACAGVVGFLML
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HHQSRVATALSNLSEGQVDVIVDAVRLEQIATKASTHRRM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA