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The map label for this gene is 88608389

Identifier: 88608389

GI number: 88608389

Start: 113711

End: 114274

Strand: Direct

Name: 88608389

Synonym: NSE_0140

Alternate gene names: NA

Gene position: 113711-114274 (Clockwise)

Preceding gene: 88608287

Following gene: 88608762

Centisome position: 13.24

GC content: 39.89

Gene sequence:

>564_bases
GTGCTTATAGCTCACATATTTTCCAAGCAGAGAGTCTTATGCATTTTTGCACTCTTTGTATTACTGTTTATTTCTGGTGT
ACTGATAGGGAATCTCGCTTTACTAAGTAGTGCGGAAACTTCTCCTTACAATAAGAAGGCAGTTTGGGTATTGAATATCT
TTGCTGTATTGTCTGTATTTATTCTTTTCTTGTGCTATACGGCAAATGGGATTCCCATTTGCCTTGGATTGCAAGGAGAG
CAAAAGACACCAAAAGTTCTAGACCCCACAGGTATTGTTTCCCACTGGCATATTTTTACACCGGAAAGTCCAGAAACACA
CAAGATTTCTGTATGTGGATCAAAAAAACAGCTAGAGATGCTAAATGAAATTATTGATCAGGCATTCGCAAGTGGACTAC
AGGAAATTCAAAATAACACACCATCAGAAACAAACCTTCTTGACCATGCAGCACCTGCTACAATATGTTCCCCCATAATT
GCACAAAGCGTACTACAGCGACCTCAAAACAGCATGTTCCTGGTAGAGCAACCTTCTGGATATGTATCCCAAACCTCTCG
TTAG

Upstream 100 bases:

>100_bases
CAATAAAAAATAATATAACCTTAATATATAAAATTCATGATGGACACATCAAGCCTTTCATCCAGAACGGCATCCCTTTA
AGTAGCAATCTAGGAACACT

Downstream 100 bases:

>100_bases
ATCTATGCATCTTCCGACACAGCAACATTACAGACTAGCATATGACTATATCTCTGTTCCGACCTCTAGATGGAAAAACA
TGGCGATATCACACGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MLIAHIFSKQRVLCIFALFVLLFISGVLIGNLALLSSAETSPYNKKAVWVLNIFAVLSVFILFLCYTANGIPICLGLQGE
QKTPKVLDPTGIVSHWHIFTPESPETHKISVCGSKKQLEMLNEIIDQAFASGLQEIQNNTPSETNLLDHAAPATICSPII
AQSVLQRPQNSMFLVEQPSGYVSQTSR

Sequences:

>Translated_187_residues
MLIAHIFSKQRVLCIFALFVLLFISGVLIGNLALLSSAETSPYNKKAVWVLNIFAVLSVFILFLCYTANGIPICLGLQGE
QKTPKVLDPTGIVSHWHIFTPESPETHKISVCGSKKQLEMLNEIIDQAFASGLQEIQNNTPSETNLLDHAAPATICSPII
AQSVLQRPQNSMFLVEQPSGYVSQTSR
>Mature_187_residues
MLIAHIFSKQRVLCIFALFVLLFISGVLIGNLALLSSAETSPYNKKAVWVLNIFAVLSVFILFLCYTANGIPICLGLQGE
QKTPKVLDPTGIVSHWHIFTPESPETHKISVCGSKKQLEMLNEIIDQAFASGLQEIQNNTPSETNLLDHAAPATICSPII
AQSVLQRPQNSMFLVEQPSGYVSQTSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20525; Mature: 20525

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIAHIFSKQRVLCIFALFVLLFISGVLIGNLALLSSAETSPYNKKAVWVLNIFAVLSVF
CEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ILFLCYTANGIPICLGLQGEQKTPKVLDPTGIVSHWHIFTPESPETHKISVCGSKKQLEM
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHEEEEECCCCCCCEEEEECCCHHHHHH
LNEIIDQAFASGLQEIQNNTPSETNLLDHAAPATICSPIIAQSVLQRPQNSMFLVEQPSG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
YVSQTSR
CCCCCCC
>Mature Secondary Structure
MLIAHIFSKQRVLCIFALFVLLFISGVLIGNLALLSSAETSPYNKKAVWVLNIFAVLSVF
CEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ILFLCYTANGIPICLGLQGEQKTPKVLDPTGIVSHWHIFTPESPETHKISVCGSKKQLEM
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHEEEEECCCCCCCEEEEECCCHHHHHH
LNEIIDQAFASGLQEIQNNTPSETNLLDHAAPATICSPIIAQSVLQRPQNSMFLVEQPSG
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCC
YVSQTSR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA