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The map label for this gene is 88608351

Identifier: 88608351

GI number: 88608351

Start: 743623

End: 746190

Strand: Reverse

Name: 88608351

Synonym: NSE_0842

Alternate gene names: NA

Gene position: 746190-743623 (Counterclockwise)

Preceding gene: 88608810

Following gene: 88608526

Centisome position: 86.87

GC content: 42.45

Gene sequence:

>2568_bases
ATGGTTCGAAGGGAAGATTATGAACATCTGACCGAGTCTGAGCTCGGTTCTCGCCCGCCTAAGGGTACATTGTTGTACAT
GGTTATTTCTGGTGTGGCACTGGCTTGGGCGTTTTTTCAGCTTTGGGTCGCATCTCCTCTGCAGTTTTATCTGGCGAATT
ATGTTGGGTCGACTGTATTCATTTTCAATGATTTTCAAGTGCGTGCTATACATCTTGCATTTGGACTTTTCTTGGCTTTG
TCGATGTTTCCAGCCTTTTCAACCTCGGAGAAAAGATATATTCCTGTTGCGGACTGGATACTGAGTCTTCTAGGTGTATG
CGCATGCTTGTATCTAGTAATCTTTTACGAGCAAATTGCGTTGAGACTTGGTATTCCGACAATAGTTGATCTGCTGATTG
CTGCGTGTGGGATGTGCGTTCTCCTTGAGGCTGCACGTAGGACAGTAGGCTTTGCGGTTGTAGCTGTTGTGTTGGTGTTT
CTTTTTTACTCCAGATTTGGTGAAGTTATGCCAGATGTTATTGCTCATAAGAACTACATGTTCTCAGCGATTGCTTCACA
GCAGTGGTTTTCTACCGAGGGTGTTTTTGGGACAGCTATTTCCGTATCTGCAGACTTTGTCTTCTTATATGTTCTTTTTG
GGGGTCTATTGGAAAAAACAGGTACAGGGAATTTCTTTATCGAACTTTCGTTTCTACTTTTAAACAGGTTTAGGGGCGGA
CCTGCAAAGGCTGCTGTAGTTTCCTCTGGACTTATGGGAATGATTTCCGGTTCTTCAATTGCGAATACTATTACTGTTGG
TTCATTGACCATTCCTATGATGAAAAAAATGGGCTTCAGCGCTGAAAAAGCTGCTGCTGTCGAAGTTTCTGCTGGAATAA
ATGGTCAGATTATGCCTCCGGTAATGGGAGCTGCTGCGTTTTTAATGGCAGAGTATCTTTCAATTCCTTATATCGAAGTT
GTAAAGCATGCTTTTCTACCGGCAATTTTAACGTATATAGCGCTTCTATATATAGTCCACGTTGAAGCCTGTAAGCTTGG
TATCGCACCTCAAATCGTTTCGGATGCCAAGAATATGAAGTTTTCTGACATGATTTGGCGTTTGCTGCTTATTTGTGCAT
CCACGGCAGTTCTTATTTCAGGTATCTATCTCCTTATGGAGGGATTTTTACAGTTCTCGGGGTTGAAGAGAATCACTGGT
TCGCATGTTATGCCCGTTATGGGGGGATTATGTGGGTTAGTATATATTTTGCTCCTGTGGTACCAGCACACACTGAGCAA
AGCGACGGATGTTGATAAATCCAGCGTGGCCTTCAAGCTGAAAACGGGCTTACATCACTTTTTGCCCTTAATTATTTTGG
TGTGGTGTCTTCTTGTGGAACGAATGTCTCCAGCGCTCTCTGCTTACTGGACGATACTTTTTCTATTTTTTGAGCTGCTT
ACAAAAGAAGTCGTTCTAAATGCTCTTGAGCGTAAGCAAGGGTTTTACTTAGCAGTGCGTGGCGGTTTCATTAACTGTGT
TAATGCAATGATAATGAGTTCAAAGAACATGACAGTAGTAGCCGTTGCAACTGCAGCAGCAGGAATCATTGTTGGTTCGG
TTTCTTTGACAGGCATAGGTTTGAAAATTGGTGGTGTTCTCGACATTGTATCTAACGGAAACCTTCTATTAACCCTGTTC
CTTACAGCAGTCATGTGTATAATCCTAGGAATGGGAATGCCTACCACAGCATGCTATATCATTGTTTCAACTCTGATGGT
CCCTGCATTAATGCATGTGACAGATAAGAGTGGGATAGTACTTCCACTATTTTCCGTTCACTTGTTTGTTTTCTATTTTG
GTCTCATGGCTGATGTTACACCCCCGGTTGGTTTAGCTTCGTATGCAGCTGCAGCTATAGCGGGTGGTAACGCAATCATG
ACGGGAGTGCAGGCGTTTTTATACAACATTAGAACCATGTTACTTCCCTTCTTGTTTGTTCTGGATCCTCAGATCTTGGG
ATTCAATCTTTCGAGTCCTCTAGATTTGTTTCAGGTTGTTGTTTTCTCTATACTGGGAATAATATGTGTAACAGCGGGGT
CACAGGGTTACTTCCTTATTAGGAGTAAGTTTTACGAGTCAGTACTGCTTTTCCTGATAGGAGTTGCTTTTTTAGCACCT
TCAATTTTCATCAATCTTGTTACACGGGAATACCTGCCCCTTGAAATGGATAAGCATGTCTTGGAAAGATTTAATGACTC
TAAAAGGCTCAGAGTCGTGCTGCAGGAACGAAGTTTTTTTGGCAATCCGGAAATAAGAAAGATCACAATACAGAACAGTA
CTGCTGGCACAGTAGGTCAACAGCTTCGTTCTTGTGGAATAGTAGCAGCGTATGATGGAGACTGCGTGTTGAACATTTTA
TCAGTCGATTATGGTGCGACGAGTCAGTGTGCAAAGTTCGATACCTCTATGAAGATTATTCGAATTATGATATCCCAGCA
ACAGATGCCAAAGTGGGTCGTGTATGCTACATCTTTTTTACTATTTTCCTGTATCTTCCTGGGCCAAAGGAAGCGTAAAA
TGTCCTGA

Upstream 100 bases:

>100_bases
CAGCATTTTTAGGTCAGTTGCTTAATTGGGAGTTTGCTTCCGCAAATTATGCTGCATCCATATAAGTGTGCAGCTTCTCT
TTTTCTTGTAGAGTTGTTTT

Downstream 100 bases:

>100_bases
ATGTTCGATTTAGTATTGCTATTTACATTCCTTCTTACGATTCTTGTCGGTGTACTTAGGGGTGCAATCAAAGAAGTATT
TAGTGCTGCTGTTGTCGTCA

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; C4-Dicarboxylate Anaerobic Carrier; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transport System Permease Component; TRAP Transporter 4TM/12TM Fusion Family; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; TRAP Transporter Permease; Integral Membrane Protein; Transcriptional Regulator DeoR Family; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; 4TM/12TM TRAP Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MVRREDYEHLTESELGSRPPKGTLLYMVISGVALAWAFFQLWVASPLQFYLANYVGSTVFIFNDFQVRAIHLAFGLFLAL
SMFPAFSTSEKRYIPVADWILSLLGVCACLYLVIFYEQIALRLGIPTIVDLLIAACGMCVLLEAARRTVGFAVVAVVLVF
LFYSRFGEVMPDVIAHKNYMFSAIASQQWFSTEGVFGTAISVSADFVFLYVLFGGLLEKTGTGNFFIELSFLLLNRFRGG
PAKAAVVSSGLMGMISGSSIANTITVGSLTIPMMKKMGFSAEKAAAVEVSAGINGQIMPPVMGAAAFLMAEYLSIPYIEV
VKHAFLPAILTYIALLYIVHVEACKLGIAPQIVSDAKNMKFSDMIWRLLLICASTAVLISGIYLLMEGFLQFSGLKRITG
SHVMPVMGGLCGLVYILLLWYQHTLSKATDVDKSSVAFKLKTGLHHFLPLIILVWCLLVERMSPALSAYWTILFLFFELL
TKEVVLNALERKQGFYLAVRGGFINCVNAMIMSSKNMTVVAVATAAAGIIVGSVSLTGIGLKIGGVLDIVSNGNLLLTLF
LTAVMCIILGMGMPTTACYIIVSTLMVPALMHVTDKSGIVLPLFSVHLFVFYFGLMADVTPPVGLASYAAAAIAGGNAIM
TGVQAFLYNIRTMLLPFLFVLDPQILGFNLSSPLDLFQVVVFSILGIICVTAGSQGYFLIRSKFYESVLLFLIGVAFLAP
SIFINLVTREYLPLEMDKHVLERFNDSKRLRVVLQERSFFGNPEIRKITIQNSTAGTVGQQLRSCGIVAAYDGDCVLNIL
SVDYGATSQCAKFDTSMKIIRIMISQQQMPKWVVYATSFLLFSCIFLGQRKRKMS

Sequences:

>Translated_855_residues
MVRREDYEHLTESELGSRPPKGTLLYMVISGVALAWAFFQLWVASPLQFYLANYVGSTVFIFNDFQVRAIHLAFGLFLAL
SMFPAFSTSEKRYIPVADWILSLLGVCACLYLVIFYEQIALRLGIPTIVDLLIAACGMCVLLEAARRTVGFAVVAVVLVF
LFYSRFGEVMPDVIAHKNYMFSAIASQQWFSTEGVFGTAISVSADFVFLYVLFGGLLEKTGTGNFFIELSFLLLNRFRGG
PAKAAVVSSGLMGMISGSSIANTITVGSLTIPMMKKMGFSAEKAAAVEVSAGINGQIMPPVMGAAAFLMAEYLSIPYIEV
VKHAFLPAILTYIALLYIVHVEACKLGIAPQIVSDAKNMKFSDMIWRLLLICASTAVLISGIYLLMEGFLQFSGLKRITG
SHVMPVMGGLCGLVYILLLWYQHTLSKATDVDKSSVAFKLKTGLHHFLPLIILVWCLLVERMSPALSAYWTILFLFFELL
TKEVVLNALERKQGFYLAVRGGFINCVNAMIMSSKNMTVVAVATAAAGIIVGSVSLTGIGLKIGGVLDIVSNGNLLLTLF
LTAVMCIILGMGMPTTACYIIVSTLMVPALMHVTDKSGIVLPLFSVHLFVFYFGLMADVTPPVGLASYAAAAIAGGNAIM
TGVQAFLYNIRTMLLPFLFVLDPQILGFNLSSPLDLFQVVVFSILGIICVTAGSQGYFLIRSKFYESVLLFLIGVAFLAP
SIFINLVTREYLPLEMDKHVLERFNDSKRLRVVLQERSFFGNPEIRKITIQNSTAGTVGQQLRSCGIVAAYDGDCVLNIL
SVDYGATSQCAKFDTSMKIIRIMISQQQMPKWVVYATSFLLFSCIFLGQRKRKMS
>Mature_855_residues
MVRREDYEHLTESELGSRPPKGTLLYMVISGVALAWAFFQLWVASPLQFYLANYVGSTVFIFNDFQVRAIHLAFGLFLAL
SMFPAFSTSEKRYIPVADWILSLLGVCACLYLVIFYEQIALRLGIPTIVDLLIAACGMCVLLEAARRTVGFAVVAVVLVF
LFYSRFGEVMPDVIAHKNYMFSAIASQQWFSTEGVFGTAISVSADFVFLYVLFGGLLEKTGTGNFFIELSFLLLNRFRGG
PAKAAVVSSGLMGMISGSSIANTITVGSLTIPMMKKMGFSAEKAAAVEVSAGINGQIMPPVMGAAAFLMAEYLSIPYIEV
VKHAFLPAILTYIALLYIVHVEACKLGIAPQIVSDAKNMKFSDMIWRLLLICASTAVLISGIYLLMEGFLQFSGLKRITG
SHVMPVMGGLCGLVYILLLWYQHTLSKATDVDKSSVAFKLKTGLHHFLPLIILVWCLLVERMSPALSAYWTILFLFFELL
TKEVVLNALERKQGFYLAVRGGFINCVNAMIMSSKNMTVVAVATAAAGIIVGSVSLTGIGLKIGGVLDIVSNGNLLLTLF
LTAVMCIILGMGMPTTACYIIVSTLMVPALMHVTDKSGIVLPLFSVHLFVFYFGLMADVTPPVGLASYAAAAIAGGNAIM
TGVQAFLYNIRTMLLPFLFVLDPQILGFNLSSPLDLFQVVVFSILGIICVTAGSQGYFLIRSKFYESVLLFLIGVAFLAP
SIFINLVTREYLPLEMDKHVLERFNDSKRLRVVLQERSFFGNPEIRKITIQNSTAGTVGQQLRSCGIVAAYDGDCVLNIL
SVDYGATSQCAKFDTSMKIIRIMISQQQMPKWVVYATSFLLFSCIFLGQRKRKMS

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93626; Mature: 93626

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRREDYEHLTESELGSRPPKGTLLYMVISGVALAWAFFQLWVASPLQFYLANYVGSTVF
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IFNDFQVRAIHLAFGLFLALSMFPAFSTSEKRYIPVADWILSLLGVCACLYLVIFYEQIA
EEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLGIPTIVDLLIAACGMCVLLEAARRTVGFAVVAVVLVFLFYSRFGEVMPDVIAHKNYM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FSAIASQQWFSTEGVFGTAISVSADFVFLYVLFGGLLEKTGTGNFFIELSFLLLNRFRGG
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCC
PAKAAVVSSGLMGMISGSSIANTITVGSLTIPMMKKMGFSAEKAAAVEVSAGINGQIMPP
CCHHHHHHCCCHHHCCCCCHHCEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH
VMGAAAFLMAEYLSIPYIEVVKHAFLPAILTYIALLYIVHVEACKLGIAPQIVSDAKNMK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
FSDMIWRLLLICASTAVLISGIYLLMEGFLQFSGLKRITGSHVMPVMGGLCGLVYILLLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHH
YQHTLSKATDVDKSSVAFKLKTGLHHFLPLIILVWCLLVERMSPALSAYWTILFLFFELL
HHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
TKEVVLNALERKQGFYLAVRGGFINCVNAMIMSSKNMTVVAVATAAAGIIVGSVSLTGIG
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHEECCEEEEEC
LKIGGVLDIVSNGNLLLTLFLTAVMCIILGMGMPTTACYIIVSTLMVPALMHVTDKSGIV
EEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LPLFSVHLFVFYFGLMADVTPPVGLASYAAAAIAGGNAIMTGVQAFLYNIRTMLLPFLFV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDPQILGFNLSSPLDLFQVVVFSILGIICVTAGSQGYFLIRSKFYESVLLFLIGVAFLAP
HCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
SIFINLVTREYLPLEMDKHVLERFNDSKRLRVVLQERSFFGNPEIRKITIQNSTAGTVGQ
HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
QLRSCGIVAAYDGDCVLNILSVDYGATSQCAKFDTSMKIIRIMISQQQMPKWVVYATSFL
HHHHCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFSCIFLGQRKRKMS
HHHHHHHCCHHHCCC
>Mature Secondary Structure
MVRREDYEHLTESELGSRPPKGTLLYMVISGVALAWAFFQLWVASPLQFYLANYVGSTVF
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
IFNDFQVRAIHLAFGLFLALSMFPAFSTSEKRYIPVADWILSLLGVCACLYLVIFYEQIA
EEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLGIPTIVDLLIAACGMCVLLEAARRTVGFAVVAVVLVFLFYSRFGEVMPDVIAHKNYM
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FSAIASQQWFSTEGVFGTAISVSADFVFLYVLFGGLLEKTGTGNFFIELSFLLLNRFRGG
HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCC
PAKAAVVSSGLMGMISGSSIANTITVGSLTIPMMKKMGFSAEKAAAVEVSAGINGQIMPP
CCHHHHHHCCCHHHCCCCCHHCEEEECCHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH
VMGAAAFLMAEYLSIPYIEVVKHAFLPAILTYIALLYIVHVEACKLGIAPQIVSDAKNMK
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
FSDMIWRLLLICASTAVLISGIYLLMEGFLQFSGLKRITGSHVMPVMGGLCGLVYILLLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHH
YQHTLSKATDVDKSSVAFKLKTGLHHFLPLIILVWCLLVERMSPALSAYWTILFLFFELL
HHHHHHHHCCCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
TKEVVLNALERKQGFYLAVRGGFINCVNAMIMSSKNMTVVAVATAAAGIIVGSVSLTGIG
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEHHHHHHHHEECCEEEEEC
LKIGGVLDIVSNGNLLLTLFLTAVMCIILGMGMPTTACYIIVSTLMVPALMHVTDKSGIV
EEECCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LPLFSVHLFVFYFGLMADVTPPVGLASYAAAAIAGGNAIMTGVQAFLYNIRTMLLPFLFV
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDPQILGFNLSSPLDLFQVVVFSILGIICVTAGSQGYFLIRSKFYESVLLFLIGVAFLAP
HCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
SIFINLVTREYLPLEMDKHVLERFNDSKRLRVVLQERSFFGNPEIRKITIQNSTAGTVGQ
HHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
QLRSCGIVAAYDGDCVLNILSVDYGATSQCAKFDTSMKIIRIMISQQQMPKWVVYATSFL
HHHHCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFSCIFLGQRKRKMS
HHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA