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The map label for this gene is bioC

Identifier: 88608302

GI number: 88608302

Start: 538355

End: 539107

Strand: Reverse

Name: bioC

Synonym: NSE_0615

Alternate gene names: 88608302

Gene position: 539107-538355 (Counterclockwise)

Preceding gene: 88608340

Following gene: 88608192

Centisome position: 62.76

GC content: 39.31

Gene sequence:

>753_bases
ATGCCAGATATAAATAACGATGTAGTAGCGGCAAATTTTAGTAGAGCAAGTTGCTCTTACGACCTCGTGGCAAAAATACA
AAAAGAGTGTTGTTATAAGTTGGTTGCGATGATACGAGAGAGGCTTCCACACTTTATACCGGCATCTGTCCTGGATATTG
GGGCTGGAACTGGTTACTTGACAAAATTATTGCTCTCAGAATTTCCTGATGCTAGTTTCACAATGAACGATATATCCTAT
GCAATGCTCAGCCGTGCTAAGGAGATAGTAGGAAAAAATGTATCCACGATCTTAGGTGATATGTCGAAAGTTAAATTTCC
CGTATCTGACCTCATTGTGTCCAGTATGGCTATACACTGGAGTTCAAACCCTGTAACAGTTTTAAAGAGGGTGTGTAGGT
CAAGTAAAGTGTTTGCATTTTCAATACTTGTTCAGCCTTCCTTATATGAATGGAATAGGTTATTTCATGAGCTTTCTTTG
CCATCGCCAGGATTACACTATATTTCATCCGAAGAAGTAGAGTTAGCAATGTTGGATACTTCTCCGACATTATTTACTTG
GGAAGTGTGCAATTTCGATATGCGGTTTGCCTCACCAAGGGAGTTTATAAGGTATATGAGACAGCTTGGCTCTAACTATT
CGCCAGATGGGTTCAATGCATATCATGTGAGGAAAGTTTTAAAACATGCGCCTGGTGAATTTTTTTCAAAATACTCAGTA
ATGTTTGGGGTGGTTTCATGGCCATATTCTTAA

Upstream 100 bases:

>100_bases
ATACACAGGGTTCACTGTTACTGCCGTGTGTGGTGTTTTTTCAGCTGCATAGAAAACGCATCAGGATGATATGATTGTAT
ACGCTACTTATTGATTGTAG

Downstream 100 bases:

>100_bases
TTTTTTCTAAATACGCGAATGAATGGGATCTAACTTTCCACTTTACTCAGGTATTGCAACTGTCATAGGAGTTAGCAATT
CGACGATGCAGTTTTAAGAG

Product: biotin biosynthesis protein BioC

Products: NA

Alternate protein names: Biotin Synthesis Protein BioC; SAM-Dependent Methyltransferase; Dethiobiotin Synthase; LOW QUALITY PROTEIN Biotin Synthesis Protein; Methyltransferase; Biotin Synthesis Protein; Biotin Synthesis-Related Fusion Protein; UbiE/COQ5 Methyltransferase Family Protein; Biotin Synthesis BioC Proein; Biotin Synthase BioC; Ubie_methyltran UbiE/COQ5 Methyltransferase Family

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MPDINNDVVAANFSRASCSYDLVAKIQKECCYKLVAMIRERLPHFIPASVLDIGAGTGYLTKLLLSEFPDASFTMNDISY
AMLSRAKEIVGKNVSTILGDMSKVKFPVSDLIVSSMAIHWSSNPVTVLKRVCRSSKVFAFSILVQPSLYEWNRLFHELSL
PSPGLHYISSEEVELAMLDTSPTLFTWEVCNFDMRFASPREFIRYMRQLGSNYSPDGFNAYHVRKVLKHAPGEFFSKYSV
MFGVVSWPYS

Sequences:

>Translated_250_residues
MPDINNDVVAANFSRASCSYDLVAKIQKECCYKLVAMIRERLPHFIPASVLDIGAGTGYLTKLLLSEFPDASFTMNDISY
AMLSRAKEIVGKNVSTILGDMSKVKFPVSDLIVSSMAIHWSSNPVTVLKRVCRSSKVFAFSILVQPSLYEWNRLFHELSL
PSPGLHYISSEEVELAMLDTSPTLFTWEVCNFDMRFASPREFIRYMRQLGSNYSPDGFNAYHVRKVLKHAPGEFFSKYSV
MFGVVSWPYS
>Mature_249_residues
PDINNDVVAANFSRASCSYDLVAKIQKECCYKLVAMIRERLPHFIPASVLDIGAGTGYLTKLLLSEFPDASFTMNDISYA
MLSRAKEIVGKNVSTILGDMSKVKFPVSDLIVSSMAIHWSSNPVTVLKRVCRSSKVFAFSILVQPSLYEWNRLFHELSLP
SPGLHYISSEEVELAMLDTSPTLFTWEVCNFDMRFASPREFIRYMRQLGSNYSPDGFNAYHVRKVLKHAPGEFFSKYSVM
FGVVSWPYS

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28275; Mature: 28144

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDINNDVVAANFSRASCSYDLVAKIQKECCYKLVAMIRERLPHFIPASVLDIGAGTGYL
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
TKLLLSEFPDASFTMNDISYAMLSRAKEIVGKNVSTILGDMSKVKFPVSDLIVSSMAIHW
HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHEEE
SSNPVTVLKRVCRSSKVFAFSILVQPSLYEWNRLFHELSLPSPGLHYISSEEVELAMLDT
CCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
SPTLFTWEVCNFDMRFASPREFIRYMRQLGSNYSPDGFNAYHVRKVLKHAPGEFFSKYSV
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MFGVVSWPYS
HHHHHCCCCC
>Mature Secondary Structure 
PDINNDVVAANFSRASCSYDLVAKIQKECCYKLVAMIRERLPHFIPASVLDIGAGTGYL
CCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHH
TKLLLSEFPDASFTMNDISYAMLSRAKEIVGKNVSTILGDMSKVKFPVSDLIVSSMAIHW
HHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHEEE
SSNPVTVLKRVCRSSKVFAFSILVQPSLYEWNRLFHELSLPSPGLHYISSEEVELAMLDT
CCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
SPTLFTWEVCNFDMRFASPREFIRYMRQLGSNYSPDGFNAYHVRKVLKHAPGEFFSKYSV
CCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
MFGVVSWPYS
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA