Click here to switch to the map view.

The map label for this gene is 88608271

Identifier: 88608271

GI number: 88608271

Start: 779288

End: 780073

Strand: Direct

Name: 88608271

Synonym: NSE_0872

Alternate gene names: NA

Gene position: 779288-780073 (Clockwise)

Preceding gene: 88608066

Following gene: 88608223

Centisome position: 90.72

GC content: 41.48

Gene sequence:

>786_bases
ATGAATATTTTCAGATCTATGATTTGGGCTTTACTGCTCGCTCTTCTGGGTGATTTTGCCAGCGCATCTCCTGCTGCTAA
GTCTGGCACTAAATTTTATGTTGGTGCTAACTACAACGCTTTTGTAGCCGGTAAAATCAGTGGAGAGGATATACATAGGG
ACATTAACACAGAAAAAGCAAAGCTCTTCTTCCCTGTAACCAAGAAGAAACTTATGGATAGCACACTTGAGAGTTTCGGT
GGTAAAATCGGATTTACCGTATCGGGTCTCAGCGTAGAAGCAGAATGCCTATATGGACGAACTGCCTCCTCAGGTTTATC
AAGTCAAACCAATGATCCTGCACACAAAACTAAGACTATCTCAGCCAGTGATGGAAAGACTAATGGGGGATATGTATACC
TATTAGGGATTCTAAATACCAACTTGGAATTCTCAGGGGTGACGTTATTCAGTCCTTACTTAAGCCTCGGGGTCGGGAGT
GGCAGCATACTCATTGAAGGAGATGATGGGAATTATGGATTTCCACTCGTAACACAACTAAGAACAGGATTAAAATCGGA
TCTTGAATTATTCTCACTATCAGTAAAACCGTATTTTGGATACAGGTTAATGCTTGTTTCAAGCATGTGCACAGAAAGGC
TGACTGATGTCCCCACAATAGTTACAAGTCGTCTAGATACAGGTCTAGGTATTGTGGATAAAATAAAGGAAGCGGTGAGC
GTGATCCGTAGCATGAGTCATGTTTCACACAATATTGAAGCTGGTATAGCTTTCTATATGCACTAA

Upstream 100 bases:

>100_bases
AAATCGTCACTAATATTGATATATCACTACCGTCTTTGTTGATAAGAAATATCTTTATGATACATTCTCCTTCTGGAATG
AAAATTCAGTCTTAGTCTTC

Downstream 100 bases:

>100_bases
TGCAGCCTAGATAAAGTAGCCTCTGACACTCCTCTTACACTACGTTTTGGCACGTAAGTTCTATCGTAGCTCAGCACTTC
CTTGAAGGACTGGGCTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MNIFRSMIWALLLALLGDFASASPAAKSGTKFYVGANYNAFVAGKISGEDIHRDINTEKAKLFFPVTKKKLMDSTLESFG
GKIGFTVSGLSVEAECLYGRTASSGLSSQTNDPAHKTKTISASDGKTNGGYVYLLGILNTNLEFSGVTLFSPYLSLGVGS
GSILIEGDDGNYGFPLVTQLRTGLKSDLELFSLSVKPYFGYRLMLVSSMCTERLTDVPTIVTSRLDTGLGIVDKIKEAVS
VIRSMSHVSHNIEAGIAFYMH

Sequences:

>Translated_261_residues
MNIFRSMIWALLLALLGDFASASPAAKSGTKFYVGANYNAFVAGKISGEDIHRDINTEKAKLFFPVTKKKLMDSTLESFG
GKIGFTVSGLSVEAECLYGRTASSGLSSQTNDPAHKTKTISASDGKTNGGYVYLLGILNTNLEFSGVTLFSPYLSLGVGS
GSILIEGDDGNYGFPLVTQLRTGLKSDLELFSLSVKPYFGYRLMLVSSMCTERLTDVPTIVTSRLDTGLGIVDKIKEAVS
VIRSMSHVSHNIEAGIAFYMH
>Mature_261_residues
MNIFRSMIWALLLALLGDFASASPAAKSGTKFYVGANYNAFVAGKISGEDIHRDINTEKAKLFFPVTKKKLMDSTLESFG
GKIGFTVSGLSVEAECLYGRTASSGLSSQTNDPAHKTKTISASDGKTNGGYVYLLGILNTNLEFSGVTLFSPYLSLGVGS
GSILIEGDDGNYGFPLVTQLRTGLKSDLELFSLSVKPYFGYRLMLVSSMCTERLTDVPTIVTSRLDTGLGIVDKIKEAVS
VIRSMSHVSHNIEAGIAFYMH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28059; Mature: 28059

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFRSMIWALLLALLGDFASASPAAKSGTKFYVGANYNAFVAGKISGEDIHRDINTEKA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHCCCCCCE
KLFFPVTKKKLMDSTLESFGGKIGFTVSGLSVEAECLYGRTASSGLSSQTNDPAHKTKTI
EEEECHHHHHHHHHHHHHHCCEEEEEEECCEEEEHEEECCCCCCCCCCCCCCCCHHEEEE
SASDGKTNGGYVYLLGILNTNLEFSGVTLFSPYLSLGVGSGSILIEGDDGNYGFPLVTQL
ECCCCCCCCCEEEEEEEECCCCEECCEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHHH
RTGLKSDLELFSLSVKPYFGYRLMLVSSMCTERLTDVPTIVTSRLDTGLGIVDKIKEAVS
HHCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
VIRSMSHVSHNIEAGIAFYMH
HHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MNIFRSMIWALLLALLGDFASASPAAKSGTKFYVGANYNAFVAGKISGEDIHRDINTEKA
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCHHHHHCCCCCCE
KLFFPVTKKKLMDSTLESFGGKIGFTVSGLSVEAECLYGRTASSGLSSQTNDPAHKTKTI
EEEECHHHHHHHHHHHHHHCCEEEEEEECCEEEEHEEECCCCCCCCCCCCCCCCHHEEEE
SASDGKTNGGYVYLLGILNTNLEFSGVTLFSPYLSLGVGSGSILIEGDDGNYGFPLVTQL
ECCCCCCCCCEEEEEEEECCCCEECCEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHHH
RTGLKSDLELFSLSVKPYFGYRLMLVSSMCTERLTDVPTIVTSRLDTGLGIVDKIKEAVS
HHCHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHH
VIRSMSHVSHNIEAGIAFYMH
HHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA