Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608258

Identifier: 88608258

GI number: 88608258

Start: 82597

End: 83676

Strand: Direct

Name: 88608258

Synonym: NSE_0104

Alternate gene names: NA

Gene position: 82597-83676 (Clockwise)

Preceding gene: 88608609

Following gene: 88608042

Centisome position: 9.62

GC content: 42.31

Gene sequence:

>1080_bases
ATGTCAACTGTAGAGTTATGTAAACCAAAGTATTTGCTTCCCATATTGTTCGTTGCTGCGGTAGGTTTGTCATGTGTAAT
TGTTGTCCTTGCAACAGGGATTGTTTTTATGAGAAGGTCTTGTGCTGAGCTTGCAAGACTTAATGAGAAGGTTGATGGTT
TACAGTGCGTGGTTGAGAATTTTTGTCCAGATTGCGCAGTTGGAAGTTTTTATAAAGAATTAGATCCGTATCTTACAGCA
AATATGGGCGTAGTTCGTGATCAACTTATTGGGCTTCAGTGTAGGGATGATTTACACCAAACTTCGTGTATACAAAGTGG
TGGTGATGTATCTACTGTACTTTATGACGCTGCTGGTGCTGCTGATGGTACACCTAACAATGGGTGCGCACTTACGGAAC
AGTTAAAACCTAAAGTGTCAGTATCACTTAAAACAAAATCACCTAAAAAGGTTGCACTGCAAGGGTTTAATCATGCGCTT
GATGTTGCTGAGTCCGTAAAAACAGAGTGCTGTGATAATGTTAAGCAAATATCGGTAGATAATGGTATCGGCATGGCTTA
TGGTGTACGGGGCCATCCTTCAGGTAGCTCACAAAATACGGAACGGCGTGCATTTGAGATAACGACTCCTGACCCAAGTC
CCAGCAAAGATTCTCTGTCTGGGGCTTCTGTCCGTAGCGTTGGTGATGGCGCTAGTAGTTCTAGACAATATGAGTGCGGT
AATCAATGTCCAAAAACACCTGGTACTGTAGTTGAGTTGGGTGATTGTGACATGTATGTTTGCAATCCGTGTCTTACAGA
TGATATGAGCCGCCCTGTTGAGTCGGATTGTAATTCACCAGATTTTGTTGAGAGTGGTGTTTCTTTCCTTAATTCACTGG
AAAAGGCTTCTAAGGATTTAGTGTCCTCTTTGGATGCTAGTTTAGTGTATGCGTCAGATATGTTATCTTCCTTCGACATG
CTACTTCCTCCTTTGAGTGGTGATAATGATTCGGTGGAATTAAAGACGTCCATTGTTACATCTGCTGGGGTGCTTAGCGT
TACTGAGTCTGAACCACCTAGTACATGTTTGGGCAATTAA

Upstream 100 bases:

>100_bases
TTTGGCTTGTTTTTCCATTCCAGTTATGAACTGTTGTTCGGGAAACATAGGATCAAATTTTGTCGTTGTATTGTCTTTTC
ATAGGTATTAGAGGTTGAAA

Downstream 100 bases:

>100_bases
AGTTTCTTTGTGGTCCAAGCATTTGGTACTAAATGTGTGAGTCCTGAAACGTATAAATCCGCTCTGAACGGGTAGGAAGT
GGGTTGATCTCACTTAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTA
NMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHAL
DVAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG
NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDM
LLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN

Sequences:

>Translated_359_residues
MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTA
NMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHAL
DVAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG
NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDM
LLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN
>Mature_358_residues
STVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTAN
MGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALD
VAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECGN
QCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDML
LPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37932; Mature: 37801

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVEN
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FCPDCAVGSFYKELDPYLTANMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGA
HCCCCHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCCC
ADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALDVAESVKTECCDNVKQISVD
CCCCCCCCCEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC
NGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG
CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDL
CCCCCCCCCEEEECCCCEEEECCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VSSLDASLVYASDMLSSFDMLLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
STVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVEN
CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FCPDCAVGSFYKELDPYLTANMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGA
HCCCCHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCCC
ADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALDVAESVKTECCDNVKQISVD
CCCCCCCCCEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC
NGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG
CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDL
CCCCCCCCCEEEECCCCEEEECCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VSSLDASLVYASDMLSSFDMLLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA