| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608258
Identifier: 88608258
GI number: 88608258
Start: 82597
End: 83676
Strand: Direct
Name: 88608258
Synonym: NSE_0104
Alternate gene names: NA
Gene position: 82597-83676 (Clockwise)
Preceding gene: 88608609
Following gene: 88608042
Centisome position: 9.62
GC content: 42.31
Gene sequence:
>1080_bases ATGTCAACTGTAGAGTTATGTAAACCAAAGTATTTGCTTCCCATATTGTTCGTTGCTGCGGTAGGTTTGTCATGTGTAAT TGTTGTCCTTGCAACAGGGATTGTTTTTATGAGAAGGTCTTGTGCTGAGCTTGCAAGACTTAATGAGAAGGTTGATGGTT TACAGTGCGTGGTTGAGAATTTTTGTCCAGATTGCGCAGTTGGAAGTTTTTATAAAGAATTAGATCCGTATCTTACAGCA AATATGGGCGTAGTTCGTGATCAACTTATTGGGCTTCAGTGTAGGGATGATTTACACCAAACTTCGTGTATACAAAGTGG TGGTGATGTATCTACTGTACTTTATGACGCTGCTGGTGCTGCTGATGGTACACCTAACAATGGGTGCGCACTTACGGAAC AGTTAAAACCTAAAGTGTCAGTATCACTTAAAACAAAATCACCTAAAAAGGTTGCACTGCAAGGGTTTAATCATGCGCTT GATGTTGCTGAGTCCGTAAAAACAGAGTGCTGTGATAATGTTAAGCAAATATCGGTAGATAATGGTATCGGCATGGCTTA TGGTGTACGGGGCCATCCTTCAGGTAGCTCACAAAATACGGAACGGCGTGCATTTGAGATAACGACTCCTGACCCAAGTC CCAGCAAAGATTCTCTGTCTGGGGCTTCTGTCCGTAGCGTTGGTGATGGCGCTAGTAGTTCTAGACAATATGAGTGCGGT AATCAATGTCCAAAAACACCTGGTACTGTAGTTGAGTTGGGTGATTGTGACATGTATGTTTGCAATCCGTGTCTTACAGA TGATATGAGCCGCCCTGTTGAGTCGGATTGTAATTCACCAGATTTTGTTGAGAGTGGTGTTTCTTTCCTTAATTCACTGG AAAAGGCTTCTAAGGATTTAGTGTCCTCTTTGGATGCTAGTTTAGTGTATGCGTCAGATATGTTATCTTCCTTCGACATG CTACTTCCTCCTTTGAGTGGTGATAATGATTCGGTGGAATTAAAGACGTCCATTGTTACATCTGCTGGGGTGCTTAGCGT TACTGAGTCTGAACCACCTAGTACATGTTTGGGCAATTAA
Upstream 100 bases:
>100_bases TTTGGCTTGTTTTTCCATTCCAGTTATGAACTGTTGTTCGGGAAACATAGGATCAAATTTTGTCGTTGTATTGTCTTTTC ATAGGTATTAGAGGTTGAAA
Downstream 100 bases:
>100_bases AGTTTCTTTGTGGTCCAAGCATTTGGTACTAAATGTGTGAGTCCTGAAACGTATAAATCCGCTCTGAACGGGTAGGAAGT GGGTTGATCTCACTTAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTA NMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHAL DVAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDM LLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN
Sequences:
>Translated_359_residues MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTA NMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHAL DVAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDM LLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN >Mature_358_residues STVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVENFCPDCAVGSFYKELDPYLTAN MGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGAADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALD VAESVKTECCDNVKQISVDNGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECGN QCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDLVSSLDASLVYASDMLSSFDML LPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37932; Mature: 37801
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVEN CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCPDCAVGSFYKELDPYLTANMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGA HCCCCHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCCC ADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALDVAESVKTECCDNVKQISVD CCCCCCCCCEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC NGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDL CCCCCCCCCEEEECCCCEEEECCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSSLDASLVYASDMLSSFDMLLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCC >Mature Secondary Structure STVELCKPKYLLPILFVAAVGLSCVIVVLATGIVFMRRSCAELARLNEKVDGLQCVVEN CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCPDCAVGSFYKELDPYLTANMGVVRDQLIGLQCRDDLHQTSCIQSGGDVSTVLYDAAGA HCCCCHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHEEECCCC ADGTPNNGCALTEQLKPKVSVSLKTKSPKKVALQGFNHALDVAESVKTECCDNVKQISVD CCCCCCCCCEEHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEECC NGIGMAYGVRGHPSGSSQNTERRAFEITTPDPSPSKDSLSGASVRSVGDGASSSRQYECG CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC NQCPKTPGTVVELGDCDMYVCNPCLTDDMSRPVESDCNSPDFVESGVSFLNSLEKASKDL CCCCCCCCCEEEECCCCEEEECCCCCHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSSLDASLVYASDMLSSFDMLLPPLSGDNDSVELKTSIVTSAGVLSVTESEPPSTCLGN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA