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The map label for this gene is fdxA [H]

Identifier: 88608216

GI number: 88608216

Start: 270789

End: 271208

Strand: Direct

Name: fdxA [H]

Synonym: NSE_0330

Alternate gene names: 88608216

Gene position: 270789-271208 (Clockwise)

Preceding gene: 88607974

Following gene: 88608311

Centisome position: 31.52

GC content: 41.43

Gene sequence:

>420_bases
ATGCCGCATGTTGTCACGGAGAAATGCGTGAAATGCAAGTACACAGACTGCGTTGAAGTCTGTCCTGTAGACTGCTTTCA
CGAAGCTGGGGAGTATTTGGTGATAGATCCAGATGTCTGCATAGATTGTGGTGTTTGTGTTCCTGAGTGTCCGATAGAGG
CGATAATTAGTGATGAAACGTATATTGATGGAAAAAGTTTAGGGGAGATTATTTCTGTGTCGGATGCTTCTCTGCTTACT
AAAAAGCAGCTTGATGCAAGGTTTATGCTGGTTTTTAATCGTGAGAGAGCGGCTGAGCTGCCCTTGATAGTTACAAAAAA
GGATCCTTTGGATGGAGCAGAGAAATGGGCTGAAGTTCCAAATAAAATTTGCTATATAAAGCAGACAGAAAGTAAAGAAA
ATGGTATAGACAATGGTTAG

Upstream 100 bases:

>100_bases
TCTGTCTTCATTGTTTTGTTGTGCTCAGTGGGTCTTTTATGGATTTGCCAAGTATGAGTATGTCGGTTAGACTGTGTGAG
TTATGTGTTTGAGCACCTGT

Downstream 100 bases:

>100_bases
GGAGTTGCTTCGTTTGGTCGTATGAGTTCTGGTAGTGGTGAGTCGTTTCTTGATCGGCTGAAAAAGAAAAAGCCTGTGAG
TAGTGGTGGAGATGGAGGGG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MPHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDETYIDGKSLGEIISVSDASLLT
KKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVPNKICYIKQTESKENGIDNG

Sequences:

>Translated_139_residues
MPHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDETYIDGKSLGEIISVSDASLLT
KKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVPNKICYIKQTESKENGIDNG
>Mature_138_residues
PHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDETYIDGKSLGEIISVSDASLLTK
KQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVPNKICYIKQTESKENGIDNG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin could play a role in regulating gene expression by interacting directly with DNA [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813
- InterPro:   IPR022569 [H]

Pfam domain/function: PF11953 DUF3470 [H]

EC number: NA

Molecular weight: Translated: 15413; Mature: 15282

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
7.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDET
CCCCCCCHHHCCCCCCHHHHCCCHHHHCCCCEEEECCCCEEECCCCCCCCCCEEEECCCE
YIDGKSLGEIISVSDASLLTKKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVP
EECCCCCCCEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHCC
NKICYIKQTESKENGIDNG
CEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
PHVVTEKCVKCKYTDCVEVCPVDCFHEAGEYLVIDPDVCIDCGVCVPECPIEAIISDET
CCCCCCHHHCCCCCCHHHHCCCHHHHCCCCEEEECCCCEEECCCCCCCCCCEEEECCCE
YIDGKSLGEIISVSDASLLTKKQLDARFMLVFNRERAAELPLIVTKKDPLDGAEKWAEVP
EECCCCCCCEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHCC
NKICYIKQTESKENGIDNG
CEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2826477; 8244942; 6848518; 7120409; 3422475; 2926817; 9600844; 10387068; 10593945; 1855590; 2153958; 1657971; 8132582 [H]