| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is 88608130
Identifier: 88608130
GI number: 88608130
Start: 511807
End: 513279
Strand: Direct
Name: 88608130
Synonym: NSE_0591
Alternate gene names: NA
Gene position: 511807-513279 (Clockwise)
Preceding gene: 88608697
Following gene: 88608721
Centisome position: 59.58
GC content: 43.04
Gene sequence:
>1473_bases ATGTTACGGATCCGTTTTGTTATACTTTCCCTTATACTGCTTCTCTGTTTACCTTCTTGTGGAAAAAAAAGAAGGGACTT TGCATCCTATCCGCTCCAGAACCCTCAAGGAATAGATTTTGAAGGCGATCCTGAATTTGTATCATCCTACATGAGGTACT TAGGCATCGCAGATGGTCAAAAAAACCCGGGAAAAGGTGCAAGCATATTCGAACTAGACAGTGTTGAAGAACTAGAAGAG TTCGAGCCTGTTGATGCAGGTTGGGAAGTCGACAAAATCCCTCCAGGAAAAACAGATTTTGAAGAGTTCCTCACTGATAA TTTGGATGCCTTAAAAACCAATATTACGGACGCGGTTAAACAGGCAAATGATTCGTTTGGAGCAGTTGCAAACGTAACGA AGAAATCCCTTGCTGAACAGCGTGGTAATAATGTTAAACGTCGTAGTAGCAAACGTGCCAGACGTACCTTTCGCAGTGCT GCATCTAAATCCACAGCAAGGAAATCAAACAACAGTCAGGGCACCACTGAAATAGCAGGGATCACTGTAGAGACAGAGGC CGAAAATGTAACAGTCTCAAGTAACACACAAGAAAAAAGTAACGCGCAAGAAAGGAATACAGCTTTCGAAGAAACTGATC TGCAGAGCGACCAAAGTACTCAAAACGTTGGTGAGCTTCTGGAACCCTCAGCAGAAGGACTACCTGAAACAGATGATATC AAAACAGAAGACAGCCGCGTAGCTCATCTGGAGCAAAAGCAGATGAGTGTCGATAAGGAAGAAAATTCTGATCTAAAAAA TCGTGATAACAGCCGTCCGACAGAGGAGCTTAATCCTGAGAAAACCGACCACGAAACCGCAACACCAGGTGCAGAAGATT CAGGTTCCAGTGACCCATCTCAATCGGGAAGTGAAAATGATCAAAAAAGCAGAACGGCTAAAGATAATCAATACGGAAAT TTGACTTGGCAGAATGACTCTACGCTGAACACAAAAATAGAAGATTCGAGTTTCACTGAATCATCCCACTCAGAAAGCGT GGATGACCAAAAAAGGGAAGCAGTTCAGGAAGAACAAGACGGAAGTGTGACGCAACAAGATAGTCCTTTCGTTTGTACTT GTGATGGAATCGATGAAACAGAAGAAGAAAGCCAAAACGATACACTTTCTGCAGAGGAAAACGTGTCTCAGCAGAACAAT CTTACTGTAGATCCATGTGAGTGCTCCTGTTGCAGTGAAACCAATGAAGTAAAAGAAGAAGTTCAGAAGAGCATCCCTCC TATAGAAAAAAGTAAGGCGGTCCAAGCCACTCAGAGTAGTTGTGCAAAGCATACCCTTAAAAGCGGTGAAGCCTTAGCAA AAATTCTGCCAGGTCTGCCATTTTGCAAAAACGAATGCGCCAGCACAGTCATATACTCGACTGACCCGATAATAGAAAAT GTCCAAGGTGATCAGAGTGAAGAGGAAAATTAG
Upstream 100 bases:
>100_bases CGCAAGATTCATAGAAATAAAACAAATATCGTGATATCTTAGCAATCTCTGCTGCCATGTTCCAAGGGGCAGACTTTTAG TTTGTAAAGTTATAGGATAA
Downstream 100 bases:
>100_bases TAAAGGACTTACTTATGTAAGGGCTCCATCATAAGTCACATATTTCGTGCGGAGCGATAAGGCCTACATCTGTACGACCT GCTATCGCTGCCCGAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN VQGDQSEEEN
Sequences:
>Translated_490_residues MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN VQGDQSEEEN >Mature_490_residues MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN VQGDQSEEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53920; Mature: 53920
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQ CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC KNPGKGASIFELDSVEELEEFEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVK CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH QANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSAASKSTARKSNNSQGTTEIAG HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPS CCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC QSGSENDQKSRTAKDNQYGNLTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQD CCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHC GSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNNLTVDPCECSCCSETNEVKEE CCCCCCCCCEEEEECCCCCHHHHCCCCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHH VQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCHHHHC VQGDQSEEEN CCCCCCCCCC >Mature Secondary Structure MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQ CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC KNPGKGASIFELDSVEELEEFEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVK CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH QANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSAASKSTARKSNNSQGTTEIAG HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE ITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPS CCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC QSGSENDQKSRTAKDNQYGNLTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQD CCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHC GSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNNLTVDPCECSCCSETNEVKEE CCCCCCCCCEEEEECCCCCHHHHCCCCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHH VQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCHHHHC VQGDQSEEEN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA