Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

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The map label for this gene is 88608130

Identifier: 88608130

GI number: 88608130

Start: 511807

End: 513279

Strand: Direct

Name: 88608130

Synonym: NSE_0591

Alternate gene names: NA

Gene position: 511807-513279 (Clockwise)

Preceding gene: 88608697

Following gene: 88608721

Centisome position: 59.58

GC content: 43.04

Gene sequence:

>1473_bases
ATGTTACGGATCCGTTTTGTTATACTTTCCCTTATACTGCTTCTCTGTTTACCTTCTTGTGGAAAAAAAAGAAGGGACTT
TGCATCCTATCCGCTCCAGAACCCTCAAGGAATAGATTTTGAAGGCGATCCTGAATTTGTATCATCCTACATGAGGTACT
TAGGCATCGCAGATGGTCAAAAAAACCCGGGAAAAGGTGCAAGCATATTCGAACTAGACAGTGTTGAAGAACTAGAAGAG
TTCGAGCCTGTTGATGCAGGTTGGGAAGTCGACAAAATCCCTCCAGGAAAAACAGATTTTGAAGAGTTCCTCACTGATAA
TTTGGATGCCTTAAAAACCAATATTACGGACGCGGTTAAACAGGCAAATGATTCGTTTGGAGCAGTTGCAAACGTAACGA
AGAAATCCCTTGCTGAACAGCGTGGTAATAATGTTAAACGTCGTAGTAGCAAACGTGCCAGACGTACCTTTCGCAGTGCT
GCATCTAAATCCACAGCAAGGAAATCAAACAACAGTCAGGGCACCACTGAAATAGCAGGGATCACTGTAGAGACAGAGGC
CGAAAATGTAACAGTCTCAAGTAACACACAAGAAAAAAGTAACGCGCAAGAAAGGAATACAGCTTTCGAAGAAACTGATC
TGCAGAGCGACCAAAGTACTCAAAACGTTGGTGAGCTTCTGGAACCCTCAGCAGAAGGACTACCTGAAACAGATGATATC
AAAACAGAAGACAGCCGCGTAGCTCATCTGGAGCAAAAGCAGATGAGTGTCGATAAGGAAGAAAATTCTGATCTAAAAAA
TCGTGATAACAGCCGTCCGACAGAGGAGCTTAATCCTGAGAAAACCGACCACGAAACCGCAACACCAGGTGCAGAAGATT
CAGGTTCCAGTGACCCATCTCAATCGGGAAGTGAAAATGATCAAAAAAGCAGAACGGCTAAAGATAATCAATACGGAAAT
TTGACTTGGCAGAATGACTCTACGCTGAACACAAAAATAGAAGATTCGAGTTTCACTGAATCATCCCACTCAGAAAGCGT
GGATGACCAAAAAAGGGAAGCAGTTCAGGAAGAACAAGACGGAAGTGTGACGCAACAAGATAGTCCTTTCGTTTGTACTT
GTGATGGAATCGATGAAACAGAAGAAGAAAGCCAAAACGATACACTTTCTGCAGAGGAAAACGTGTCTCAGCAGAACAAT
CTTACTGTAGATCCATGTGAGTGCTCCTGTTGCAGTGAAACCAATGAAGTAAAAGAAGAAGTTCAGAAGAGCATCCCTCC
TATAGAAAAAAGTAAGGCGGTCCAAGCCACTCAGAGTAGTTGTGCAAAGCATACCCTTAAAAGCGGTGAAGCCTTAGCAA
AAATTCTGCCAGGTCTGCCATTTTGCAAAAACGAATGCGCCAGCACAGTCATATACTCGACTGACCCGATAATAGAAAAT
GTCCAAGGTGATCAGAGTGAAGAGGAAAATTAG

Upstream 100 bases:

>100_bases
CGCAAGATTCATAGAAATAAAACAAATATCGTGATATCTTAGCAATCTCTGCTGCCATGTTCCAAGGGGCAGACTTTTAG
TTTGTAAAGTTATAGGATAA

Downstream 100 bases:

>100_bases
TAAAGGACTTACTTATGTAAGGGCTCCATCATAAGTCACATATTTCGTGCGGAGCGATAAGGCCTACATCTGTACGACCT
GCTATCGCTGCCCGAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE
FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA
ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI
KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN
LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN
LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN
VQGDQSEEEN

Sequences:

>Translated_490_residues
MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE
FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA
ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI
KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN
LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN
LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN
VQGDQSEEEN
>Mature_490_residues
MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQKNPGKGASIFELDSVEELEE
FEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVKQANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSA
ASKSTARKSNNSQGTTEIAGITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI
KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPSQSGSENDQKSRTAKDNQYGN
LTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQDGSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNN
LTVDPCECSCCSETNEVKEEVQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN
VQGDQSEEEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53920; Mature: 53920

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQ
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KNPGKGASIFELDSVEELEEFEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVK
CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
QANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSAASKSTARKSNNSQGTTEIAG
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI
EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC
KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPS
CCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
QSGSENDQKSRTAKDNQYGNLTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQD
CCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHC
GSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNNLTVDPCECSCCSETNEVKEE
CCCCCCCCCEEEEECCCCCHHHHCCCCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHH
VQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCHHHHC
VQGDQSEEEN
CCCCCCCCCC
>Mature Secondary Structure
MLRIRFVILSLILLLCLPSCGKKRRDFASYPLQNPQGIDFEGDPEFVSSYMRYLGIADGQ
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
KNPGKGASIFELDSVEELEEFEPVDAGWEVDKIPPGKTDFEEFLTDNLDALKTNITDAVK
CCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
QANDSFGAVANVTKKSLAEQRGNNVKRRSSKRARRTFRSAASKSTARKSNNSQGTTEIAG
HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
ITVETEAENVTVSSNTQEKSNAQERNTAFEETDLQSDQSTQNVGELLEPSAEGLPETDDI
EEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC
KTEDSRVAHLEQKQMSVDKEENSDLKNRDNSRPTEELNPEKTDHETATPGAEDSGSSDPS
CCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
QSGSENDQKSRTAKDNQYGNLTWQNDSTLNTKIEDSSFTESSHSESVDDQKREAVQEEQD
CCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHC
GSVTQQDSPFVCTCDGIDETEEESQNDTLSAEENVSQQNNLTVDPCECSCCSETNEVKEE
CCCCCCCCCEEEEECCCCCHHHHCCCCCCCHHHHCCCCCCCEECCCCCCCCCCHHHHHHH
VQKSIPPIEKSKAVQATQSSCAKHTLKSGEALAKILPGLPFCKNECASTVIYSTDPIIEN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEECCCHHHHC
VQGDQSEEEN
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA