Definition Neorickettsia sennetsu str. Miyayama chromosome, complete genome.
Accession NC_007798
Length 859,006

Click here to switch to the map view.

The map label for this gene is 88608098

Identifier: 88608098

GI number: 88608098

Start: 583717

End: 583833

Strand: Direct

Name: 88608098

Synonym: NSE_0666

Alternate gene names: NA

Gene position: 583717-583833 (Clockwise)

Preceding gene: 88608328

Following gene: 88608463

Centisome position: 67.95

GC content: 34.19

Gene sequence:

>117_bases
GTGCGCGAAAAACAAGAACAAATCGAGAATTATATACAACTGCTTACAAAACTTCATATTAACAAACCATTGGAAAAGCA
AAATAGCTTTTGGGCGAGTTCCAATCACGTAAACTAA

Upstream 100 bases:

>100_bases
TACCTCCAGATGCCCCGGTGACCAGTATGCGCTTATCACGGAGACTAAAACCCATCTCAAGACTAATAAAATAGAACCAG
GAGGCAGTTTAGCACCATGC

Downstream 100 bases:

>100_bases
CCATCCGTAGCAATCATAGGTCGTCAAATCCTTTCTACTGCTTTACACCATTTATAGACATCTAATTCATATAGCTTGCA
CACTTTGCTTATTGAAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MREKQEQIENYIQLLTKLHINKPLEKQNSFWASSNHVN

Sequences:

>Translated_38_residues
MREKQEQIENYIQLLTKLHINKPLEKQNSFWASSNHVN
>Mature_38_residues
MREKQEQIENYIQLLTKLHINKPLEKQNSFWASSNHVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4610; Mature: 4610

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKQEQIENYIQLLTKLHINKPLEKQNSFWASSNHVN
CCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MREKQEQIENYIQLLTKLHINKPLEKQNSFWASSNHVN
CCCHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA