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The map label for this gene is 88608078

Identifier: 88608078

GI number: 88608078

Start: 75251

End: 75754

Strand: Direct

Name: 88608078

Synonym: NSE_0088

Alternate gene names: NA

Gene position: 75251-75754 (Clockwise)

Preceding gene: 88608442

Following gene: 88608666

Centisome position: 8.76

GC content: 45.04

Gene sequence:

>504_bases
ATGCGTGTTATACCATGGGTTGCTATATTTGCAACTTATTTGCTTTTAAGGGCACATTTCAAATTCAATAGTATGAAGAT
TATGATGTGTCTTGTTGTGCCCATTATAGTGTTGATTCCTATTACGATTTGTTGGATAACGCGTTCAGGTGCGAGTTATG
CGCAAGATAAAAAGGATGCTAATACAAGTGGAGATACGCTGCTTAGAGTGGGTCTATGGGCTAGAGGTGCATTAGTATTT
TTTCTGGCTCTGGCAGCCCTTTTTATTACTGGGTCCGTGGTCCTTGCATATTTTACGGATAGTACTGAAGGGAAGCTTAA
GGCTGCACTTCTGACTGGCGAAGCGGTGTGCACAGTCATTTGCGCTGTGTTGCTATGTATGGCGTTCTCTAGTCTCTGTG
TTCAGGCTGCTTGCACATGTGCTGGACCTGATTCTAGCCTTTCCTCACAGGATTTGCCACAATTAGCAGCTGGGAGGGCT
GTCTCCGTAAGCGGCGCAGCATAA

Upstream 100 bases:

>100_bases
GTTAGATGACCGGTTCATCTTTCGTATTGTGCTTTCATTGTAACCTTTGTTTTTTATAACTATGTCCAAAAGAACATTGA
AGAGTAGGTGTGATGGTATA

Downstream 100 bases:

>100_bases
CATCTAAATCACAGATATTAAACTTGGTACTATATTAGATTACGGCAAATAAGACACAGTGTACCACGATGTTTGCTGTA
TCTAAGGCATGAATATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRVIPWVAIFATYLLLRAHFKFNSMKIMMCLVVPIIVLIPITICWITRSGASYAQDKKDANTSGDTLLRVGLWARGALVF
FLALAALFITGSVVLAYFTDSTEGKLKAALLTGEAVCTVICAVLLCMAFSSLCVQAACTCAGPDSSLSSQDLPQLAAGRA
VSVSGAA

Sequences:

>Translated_167_residues
MRVIPWVAIFATYLLLRAHFKFNSMKIMMCLVVPIIVLIPITICWITRSGASYAQDKKDANTSGDTLLRVGLWARGALVF
FLALAALFITGSVVLAYFTDSTEGKLKAALLTGEAVCTVICAVLLCMAFSSLCVQAACTCAGPDSSLSSQDLPQLAAGRA
VSVSGAA
>Mature_167_residues
MRVIPWVAIFATYLLLRAHFKFNSMKIMMCLVVPIIVLIPITICWITRSGASYAQDKKDANTSGDTLLRVGLWARGALVF
FLALAALFITGSVVLAYFTDSTEGKLKAALLTGEAVCTVICAVLLCMAFSSLCVQAACTCAGPDSSLSSQDLPQLAAGRA
VSVSGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17643; Mature: 17643

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIPWVAIFATYLLLRAHFKFNSMKIMMCLVVPIIVLIPITICWITRSGASYAQDKKDA
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
NTSGDTLLRVGLWARGALVFFLALAALFITGSVVLAYFTDSTEGKLKAALLTGEAVCTVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
CAVLLCMAFSSLCVQAACTCAGPDSSLSSQDLPQLAAGRAVSVSGAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCC
>Mature Secondary Structure
MRVIPWVAIFATYLLLRAHFKFNSMKIMMCLVVPIIVLIPITICWITRSGASYAQDKKDA
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
NTSGDTLLRVGLWARGALVFFLALAALFITGSVVLAYFTDSTEGKLKAALLTGEAVCTVI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHH
CAVLLCMAFSSLCVQAACTCAGPDSSLSSQDLPQLAAGRAVSVSGAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA