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The map label for this gene is 88608049

Identifier: 88608049

GI number: 88608049

Start: 806668

End: 807666

Strand: Direct

Name: 88608049

Synonym: NSE_0908

Alternate gene names: NA

Gene position: 806668-807666 (Clockwise)

Preceding gene: 88608722

Following gene: 88608807

Centisome position: 93.91

GC content: 35.14

Gene sequence:

>999_bases
ATGATTTTTATGGTAGAAGATACACTTTTGAGCGTACTTTCCGATGAAACACATTTTCAAAATTTAACCGATGGAATCTT
CCTTAGTTTGGTTAAGGATCCGAATTTTACTAGTGCATCAAAAGGCGTGAGTAAGGCAGAATTGAAAGATGTACTCACCA
GTGAAAACTTTAAGGAATTATTTGAAAATCAAGCTAAAGCTAGCATTGCAAAAACCATACTGACTAACCAAAATGCAACA
GATGTTCTTACCGATGGTACAGCTAGTGCTGTTATAACGAATGATAACGCCAAAGAAGTGCTAAAAAATGCAAATGCAGC
TGAGTTACTCAAGGATAGCAATGCGACTGAAGTACTAAAGGATGAGACAGCGAAGGAAATATTAAAAAACAGCAAGTTTA
AAGAAACTTTGAAAGGCACAGGCAAAGACATAATAAAAAACATCCTCACAGATAGCACTGGCACTTTCAAAGGACTCGTT
GAATGTGTGGGAAAAGATAAAGTGGAAAATGTTCTTACAAATCAGATTTTCAAAAAGCTGTTCGAAAGTCCAGGTAATGA
AGAAATAAAAGATATACTTATTAACGGAAATTTCGAGGCATCATTTGAGAATAAAGAAAGTGCCGAAAAATTAAAAGAGA
CTCTTACCGGCGGAACTGTTAAAAAACTATTTAGCGACCCAGTAAAAGCTGAACGTGTAAAAAATTTGTTCGCTGGTGAT
AACTTTGCAGAACTTTTTCAACACAACAAGTTGAATGACTTGGTAAACGATCAACATTTTACGAATCTGTTCAAAAATGA
AACAACGGCTGGACACGTAACCAACATCTTAACCTCTCCTCACTTCAAAACATCACTTGAAGATAATGAGGTAGCTACCA
ATTTGAAAAAATTACTCACAAATTCAGCACTAAAAGAGCTATTTAGCAATAATAGTCTGGCAGACGCAAATAGCTTCGCT
AAGAAACTTAAAGAACTAGGAATGATATCAACAAACTAA

Upstream 100 bases:

>100_bases
AATAGAAAAGAAATATAAAATTTAGTAATTCTATACATTATAATTTTATACATTTTTCACGAGTTAGGGCTACTATCCCT
GAGTAGATTTCTTAAGATAA

Downstream 100 bases:

>100_bases
CAAACACATCACCAAAGCACCAGCCACTCAAGAAACTAGAGCTTAATCTACGCTCAAGCCAAAGCTGGTGCCACAGCTCT
GAAGATAGAAAGCTAAATTC

Product: strain-specific surface antigen

Products: NA

Alternate protein names: Strain-Specific Surface Antigen; 50 KDa Strain-Specific Antigen

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIFMVEDTLLSVLSDETHFQNLTDGIFLSLVKDPNFTSASKGVSKAELKDVLTSENFKELFENQAKASIAKTILTNQNAT
DVLTDGTASAVITNDNAKEVLKNANAAELLKDSNATEVLKDETAKEILKNSKFKETLKGTGKDIIKNILTDSTGTFKGLV
ECVGKDKVENVLTNQIFKKLFESPGNEEIKDILINGNFEASFENKESAEKLKETLTGGTVKKLFSDPVKAERVKNLFAGD
NFAELFQHNKLNDLVNDQHFTNLFKNETTAGHVTNILTSPHFKTSLEDNEVATNLKKLLTNSALKELFSNNSLADANSFA
KKLKELGMISTN

Sequences:

>Translated_332_residues
MIFMVEDTLLSVLSDETHFQNLTDGIFLSLVKDPNFTSASKGVSKAELKDVLTSENFKELFENQAKASIAKTILTNQNAT
DVLTDGTASAVITNDNAKEVLKNANAAELLKDSNATEVLKDETAKEILKNSKFKETLKGTGKDIIKNILTDSTGTFKGLV
ECVGKDKVENVLTNQIFKKLFESPGNEEIKDILINGNFEASFENKESAEKLKETLTGGTVKKLFSDPVKAERVKNLFAGD
NFAELFQHNKLNDLVNDQHFTNLFKNETTAGHVTNILTSPHFKTSLEDNEVATNLKKLLTNSALKELFSNNSLADANSFA
KKLKELGMISTN
>Mature_332_residues
MIFMVEDTLLSVLSDETHFQNLTDGIFLSLVKDPNFTSASKGVSKAELKDVLTSENFKELFENQAKASIAKTILTNQNAT
DVLTDGTASAVITNDNAKEVLKNANAAELLKDSNATEVLKDETAKEILKNSKFKETLKGTGKDIIKNILTDSTGTFKGLV
ECVGKDKVENVLTNQIFKKLFESPGNEEIKDILINGNFEASFENKESAEKLKETLTGGTVKKLFSDPVKAERVKNLFAGD
NFAELFQHNKLNDLVNDQHFTNLFKNETTAGHVTNILTSPHFKTSLEDNEVATNLKKLLTNSALKELFSNNSLADANSFA
KKLKELGMISTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36535; Mature: 36535

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFMVEDTLLSVLSDETHFQNLTDGIFLSLVKDPNFTSASKGVSKAELKDVLTSENFKEL
CEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCHHHHHH
FENQAKASIAKTILTNQNATDVLTDGTASAVITNDNAKEVLKNANAAELLKDSNATEVLK
HHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEECCCHHHHHHCCCHHHHHHCCCHHHHHH
DETAKEILKNSKFKETLKGTGKDIIKNILTDSTGTFKGLVECVGKDKVENVLTNQIFKKL
HHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
FESPGNEEIKDILINGNFEASFENKESAEKLKETLTGGTVKKLFSDPVKAERVKNLFAGD
HCCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCC
NFAELFQHNKLNDLVNDQHFTNLFKNETTAGHVTNILTSPHFKTSLEDNEVATNLKKLLT
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NSALKELFSNNSLADANSFAKKLKELGMISTN
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIFMVEDTLLSVLSDETHFQNLTDGIFLSLVKDPNFTSASKGVSKAELKDVLTSENFKEL
CEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHCCHHHHHH
FENQAKASIAKTILTNQNATDVLTDGTASAVITNDNAKEVLKNANAAELLKDSNATEVLK
HHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEECCCHHHHHHCCCHHHHHHCCCHHHHHH
DETAKEILKNSKFKETLKGTGKDIIKNILTDSTGTFKGLVECVGKDKVENVLTNQIFKKL
HHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHH
FESPGNEEIKDILINGNFEASFENKESAEKLKETLTGGTVKKLFSDPVKAERVKNLFAGD
HCCCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCC
NFAELFQHNKLNDLVNDQHFTNLFKNETTAGHVTNILTSPHFKTSLEDNEVATNLKKLLT
CHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
NSALKELFSNNSLADANSFAKKLKELGMISTN
HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA