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The map label for this gene is 88607977

Identifier: 88607977

GI number: 88607977

Start: 455068

End: 455505

Strand: Reverse

Name: 88607977

Synonym: NSE_0527

Alternate gene names: NA

Gene position: 455505-455068 (Counterclockwise)

Preceding gene: 88608403

Following gene: 88608725

Centisome position: 53.03

GC content: 42.01

Gene sequence:

>438_bases
ATGGATGTGAGGCTTTTTTCTGGGACACTTGTTCTTTTAGTATCGGCTCTTATTTTTGTTTTTCTGAGTAGTAACTTCTC
ACTTCTAAAAAGAGGTGGTTGTTATGAATTAAACGCTATATTTGATGATGCGTTGGGTCTTTCAATCGGTAGCGATGTTT
TGCTTTCTGGTGTGAAGGCTGGCAGAATTACGAAGTTATCCATAGGGGAGTCATTTAGAGTGCATGTAAGAATGTGTATT
GATGAAGGGGTCCGCCTACCGCGCGACAGTGTAGCAGTGATTTCAGCAGGGAACATCTTTTCTACCACGAAGAACATTAA
CATAGACCCAGGCATCAGTAGTGAGATACTTCCACCAGGCGGAACGTTTGAGACTACGCGCTCCGCACTGGATATGGAAA
AAATCCTTAGATCGATAATAAAGCTAAAGCTTAGATAG

Upstream 100 bases:

>100_bases
GCATCGCGGTTTTGTGGGTTGGGTGAGACTTCTCCAAGGGCTAAAGTGGATGCTTTGTCTTATGTAGCGTGGAGGCCATA
GTAGTTTTGCTTATCGGTAT

Downstream 100 bases:

>100_bases
GTGCTAGCCTCATTCTATGGCCAGGGGTGGTGACGTCGCTAGATGGAAGACTGGTGCTAGGAGTTTCGTTGTCCGGATCC
CCGGAATGGGGATTAGATGT

Product: mce-like protein

Products: NA

Alternate protein names: Conserved Family Protein; Virulence Factor Mce Family Protein; ABC Transporter; Mammalian Cell Entry Related Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDVRLFSGTLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKAGRITKLSIGESFRVHVRMCI
DEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPGGTFETTRSALDMEKILRSIIKLKLR

Sequences:

>Translated_145_residues
MDVRLFSGTLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKAGRITKLSIGESFRVHVRMCI
DEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPGGTFETTRSALDMEKILRSIIKLKLR
>Mature_145_residues
MDVRLFSGTLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKAGRITKLSIGESFRVHVRMCI
DEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPGGTFETTRSALDMEKILRSIIKLKLR

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15688; Mature: 15688

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVRLFSGTLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKA
CCEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHCCCCC
GRITKLSIGESFRVHVRMCIDEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPG
CCEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEECCCCCEECCCCCCCCCCCC
GTFETTRSALDMEKILRSIIKLKLR
CCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDVRLFSGTLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKA
CCEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEHHHHHHHHCCCCCCHHHHCCCCC
GRITKLSIGESFRVHVRMCIDEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPG
CCEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEECCCEEECCCCCEECCCCCCCCCCCC
GTFETTRSALDMEKILRSIIKLKLR
CCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA