| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607733
Identifier: 88607733
GI number: 88607733
Start: 593577
End: 594557
Strand: Direct
Name: 88607733
Synonym: APH_0566
Alternate gene names: NA
Gene position: 593577-594557 (Clockwise)
Preceding gene: 88607648
Following gene: 88606927
Centisome position: 40.34
GC content: 38.63
Gene sequence:
>981_bases GTGCCTATTGATAAGTTCATGAGGGAGGCGCTATATGATCGAACATGTGGCTACTATATGACACATGTTCCGTTTGGTTT GAGTGGGGACTTTATTACATCTCCTGACATTAGCCAATTATTTGGTGAGACTATAGCAATCTGGCTTCTGCAATATTTAG AGTATGTAAAACTTTCTGAGCGGTGCATTTTAGTTGAATTAGGTCCGGGTAGAGGCACTCTTATGAGTGATATACTAAGG ATACTAAGCTGTTTCCCGCAGTATGACAGCTTGTTTGAGGTCCACCTCGTGGAGATTAGTCCACTGTTGCGCAATATACA GAAAGAGACGCTAAAAGAAGCTATGCTACGTAAAAAAATTTTTTGGCATGACAGTGTATATGATCTTCCGGAATGTACGA CTATACTAATAGCCAATGAGTTTTTTGATGCATTACCTATCAAGCAGTTTGTATTTCATGACGGAATGTGGTTTGAAAAT TATGTTCGTTCATGTGCTGAAGGCTTGGATATTATCCCGGTTAAAAGTACGGACTTTATTTTTCCAGACAACAATGTGCC GGATGGAGGAGTTATTGAGATATGTGAAGCTGCTACAGATATTATAAGAAATATAGAAGGGGTTTTGCTAAAACACGGTG GCACGGCGTTAATAGTGGATTATGGGTACATGCATCCTGTTTATAAAAGCACGATTCAGGCTGTGAGAAATCATCAGTAT TGTAGTTTTCTAGATCACATAGGAGAGAGCGACATTTCTGCATCTGTTGACTTTGTTATGTTGCAGAAAAGTTTAAAAGA GATAAAATGCGAGGCCATGACTCAGCGAGAATTTCTCTATAGATTTGGTATACGTGAGAGATTAGAGTTCCTTATGCAAC GAGCGCAAGCAAAGCAAGCGGAAGATCTTAAATGTGGATTTCTTAGGTTAACGGAAAACATGGGTACTTTGTTCAAGGTT TTGTTATTAAATTATATATAG
Upstream 100 bases:
>100_bases TGCCCTAAGCAGCTACAACTTTTTAACTTATTGAAGTAAAATAAATATTAACACACTGGTAAAAGTAATGAAGCACTCGA TCTTTTCTGACAGCAACGCA
Downstream 100 bases:
>100_bases TACTACCGGTTAATGCGTAGCTGTAATACGACAACAATGAATATGCACTTATAGATTCTAAAGCTATAGCCAATAAACTT GTTATTGGTTTTGATGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MPIDKFMREALYDRTCGYYMTHVPFGLSGDFITSPDISQLFGETIAIWLLQYLEYVKLSERCILVELGPGRGTLMSDILR ILSCFPQYDSLFEVHLVEISPLLRNIQKETLKEAMLRKKIFWHDSVYDLPECTTILIANEFFDALPIKQFVFHDGMWFEN YVRSCAEGLDIIPVKSTDFIFPDNNVPDGGVIEICEAATDIIRNIEGVLLKHGGTALIVDYGYMHPVYKSTIQAVRNHQY CSFLDHIGESDISASVDFVMLQKSLKEIKCEAMTQREFLYRFGIRERLEFLMQRAQAKQAEDLKCGFLRLTENMGTLFKV LLLNYI
Sequences:
>Translated_326_residues MPIDKFMREALYDRTCGYYMTHVPFGLSGDFITSPDISQLFGETIAIWLLQYLEYVKLSERCILVELGPGRGTLMSDILR ILSCFPQYDSLFEVHLVEISPLLRNIQKETLKEAMLRKKIFWHDSVYDLPECTTILIANEFFDALPIKQFVFHDGMWFEN YVRSCAEGLDIIPVKSTDFIFPDNNVPDGGVIEICEAATDIIRNIEGVLLKHGGTALIVDYGYMHPVYKSTIQAVRNHQY CSFLDHIGESDISASVDFVMLQKSLKEIKCEAMTQREFLYRFGIRERLEFLMQRAQAKQAEDLKCGFLRLTENMGTLFKV LLLNYI >Mature_325_residues PIDKFMREALYDRTCGYYMTHVPFGLSGDFITSPDISQLFGETIAIWLLQYLEYVKLSERCILVELGPGRGTLMSDILRI LSCFPQYDSLFEVHLVEISPLLRNIQKETLKEAMLRKKIFWHDSVYDLPECTTILIANEFFDALPIKQFVFHDGMWFENY VRSCAEGLDIIPVKSTDFIFPDNNVPDGGVIEICEAATDIIRNIEGVLLKHGGTALIVDYGYMHPVYKSTIQAVRNHQYC SFLDHIGESDISASVDFVMLQKSLKEIKCEAMTQREFLYRFGIRERLEFLMQRAQAKQAEDLKCGFLRLTENMGTLFKVL LLNYI
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=330, Percent_Identity=32.4242424242424, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193211224, Length=351, Percent_Identity=34.1880341880342, Blast_Score=160, Evalue=9e-40, Organism=Drosophila melanogaster, GI24645885, Length=360, Percent_Identity=33.8888888888889, Blast_Score=176, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37614; Mature: 37483
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDKFMREALYDRTCGYYMTHVPFGLSGDFITSPDISQLFGETIAIWLLQYLEYVKLSE CCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RCILVELGPGRGTLMSDILRILSCFPQYDSLFEVHLVEISPLLRNIQKETLKEAMLRKKI CEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWHDSVYDLPECTTILIANEFFDALPIKQFVFHDGMWFENYVRSCAEGLDIIPVKSTDFI HHCCCCCCCCCHHHHEEHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCEE FPDNNVPDGGVIEICEAATDIIRNIEGVLLKHGGTALIVDYGYMHPVYKSTIQAVRNHQY CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHCCHH CSFLDHIGESDISASVDFVMLQKSLKEIKCEAMTQREFLYRFGIRERLEFLMQRAQAKQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC EDLKCGFLRLTENMGTLFKVLLLNYI CCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIDKFMREALYDRTCGYYMTHVPFGLSGDFITSPDISQLFGETIAIWLLQYLEYVKLSE CHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RCILVELGPGRGTLMSDILRILSCFPQYDSLFEVHLVEISPLLRNIQKETLKEAMLRKKI CEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWHDSVYDLPECTTILIANEFFDALPIKQFVFHDGMWFENYVRSCAEGLDIIPVKSTDFI HHCCCCCCCCCHHHHEEHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCCEE FPDNNVPDGGVIEICEAATDIIRNIEGVLLKHGGTALIVDYGYMHPVYKSTIQAVRNHQY CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHHHHHHCCHH CSFLDHIGESDISASVDFVMLQKSLKEIKCEAMTQREFLYRFGIRERLEFLMQRAQAKQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC EDLKCGFLRLTENMGTLFKVLLLNYI CCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA