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The map label for this gene is recR

Identifier: 88607618

GI number: 88607618

Start: 1046524

End: 1047108

Strand: Direct

Name: recR

Synonym: APH_0988

Alternate gene names: 88607618

Gene position: 1046524-1047108 (Clockwise)

Preceding gene: 88607679

Following gene: 88607037

Centisome position: 71.13

GC content: 44.1

Gene sequence:

>585_bases
ATGGACATAAGTAGATTAATTAGTTTATTCTCTAAGCTTCCTGGTTTAGGGCCTGCTTCTTCACGCAGGATTGTTCTACA
CCTTCTTCGACACAGACATGACGTTATGACACCCCTAGCCAATGGCATCAGGGAATTGGAAGAAAGTACAAAAGAATGCG
AAATCTGTTTTAATTTGGATGTGACTTCTCCATGTAGCATATGCACCGATAGCAGACGTGACAAGAGTTTGCTTTGCATC
GTCGAGGAATTGGGTGATTTGTGGGCTTTTGAAAAAGGAAGAATATATCAAGGTATGTACCACGTGCTCGGTGGTGTTCT
ATCAGCGTTGTCTGGTGTGGGCCCTGAAGACTTAAATATGAGCAGCATACCCGAGAGAGTCAGGTTACACGGTGTAAAAG
AAGTGATAGTTGCTACCGGCAGTGATATGGATGGTCAGGTAACGTGTCACTACATTGCGCAATCAATAAAGAGTACAGGA
GTTAAGGTTACGAGGCTCGCATGCGGTATTCCTCTAGGTGGTGAGATAGACTATCTAGATGAGGGAACGCTTCGTGCAGC
GTTATCTTCACGCTATATCATATAG

Upstream 100 bases:

>100_bases
TACCAAGGACGAGTTAAATCATTAGCTGGGATAGTCCTTTTACTGGTCAAAGCTTTTCATAGTTTTGCTGAAGAGAGAGT
ATGTGTTGTAAGAAGGTGTG

Downstream 100 bases:

>100_bases
TGATAAATTGTTAAACTAGCATAGAAATACACAGTACTGCTTTCTATAATAAGGACACTTTACAAAAGTGCACTCAGTTA
CATGGATCTAAAGATTTAAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDVTSPCSICTDSRRDKSLLCI
VEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMSSIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTG
VKVTRLACGIPLGGEIDYLDEGTLRAALSSRYII

Sequences:

>Translated_194_residues
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDVTSPCSICTDSRRDKSLLCI
VEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMSSIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTG
VKVTRLACGIPLGGEIDYLDEGTLRAALSSRYII
>Mature_194_residues
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLDVTSPCSICTDSRRDKSLLCI
VEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNMSSIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTG
VKVTRLACGIPLGGEIDYLDEGTLRAALSSRYII

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=32.1243523316062, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_ANAPZ (Q2GJA0)

Other databases:

- EMBL:   CP000235
- RefSeq:   YP_505551.1
- ProteinModelPortal:   Q2GJA0
- SMR:   Q2GJA0
- STRING:   Q2GJA0
- GeneID:   3930584
- GenomeReviews:   CP000235_GR
- KEGG:   aph:APH_0988
- NMPDR:   fig|212042.5.peg.933
- TIGR:   APH_0988
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   APHA212042:APH_0988-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21243; Mature: 21243

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLD
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
VTSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNM
CCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
SSIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTGVKVTRLACGIPLGGEIDYLD
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEHHEECCCCCCCCCCCC
EGTLRAALSSRYII
CHHHHHHHHCCCCC
>Mature Secondary Structure
MDISRLISLFSKLPGLGPASSRRIVLHLLRHRHDVMTPLANGIRELEESTKECEICFNLD
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
VTSPCSICTDSRRDKSLLCIVEELGDLWAFEKGRIYQGMYHVLGGVLSALSGVGPEDLNM
CCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH
SSIPERVRLHGVKEVIVATGSDMDGQVTCHYIAQSIKSTGVKVTRLACGIPLGGEIDYLD
HHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCEEEHHEECCCCCCCCCCCC
EGTLRAALSSRYII
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA