| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607585
Identifier: 88607585
GI number: 88607585
Start: 872490
End: 873500
Strand: Reverse
Name: 88607585
Synonym: APH_0823
Alternate gene names: NA
Gene position: 873500-872490 (Counterclockwise)
Preceding gene: 88607382
Following gene: 88606828
Centisome position: 59.37
GC content: 41.54
Gene sequence:
>1011_bases ATGAATTTATCCGACATAGTACTGGACTTACATCCCTATGTTGCAGACATCTTAGAAGTATGGGAAGATGGAAGCTCAGA AGAATTCTGCGATGCTATACTTGAGAGTATAGATAATGATGAAAATCCTCAAGGCGTTCGAGCGGCATTTATGTATTTGA TAGATAGGGCTGAATATGCTCTAAGAAGAGCGCAAACACGTGCTCTAAGCAGGCCGATGACGGAACATCGCTGGATTTGT ATTAACGAAGCACTACGCGCGGTGTGTTCCTGTAGTAGCGGCGTGAGGTTATCAAGCACTCGCCAGATATATTTTCTGCT ACATTCAGCTATATTACATGCTAGCTTTGCTTATTTTGATAGAGGCGACGCACCACGCACAATACACAACGACTCGTACA ACTTGCAAGATTCCATCTCTTTTCTCACCTCAGCGCTGGCTGTAGTATTGCGACAAGCCAATAAAGATCGGGCTAACGTT ACCCGTTTCTGGGATGAGAATGCTATACCTCTGCTATCTAGCCTATCTGATAGTACAATCTATGATACGTTCATAAAAGC GTACGATAGAGCTGCGCAAATAATAATGCGTATGCAGCAAATCCTGCAAAATACAGGTGTTTATAGTAGGACGCGAAATT TATGTAACATACTTCATAATATAACTATACTTGACTTCAGGCGTTCGGGTATTAGTGCTGCCTTAGATTCTGATTACGAT TCTGATGCCGAGGACATAGTTCTAAGCATACAAAATGACATGGGCTTTTATGAGAGGTTAAATGGATTATTCGAAAGCTT TCCTATACGCAATATTGGTAATTCCAACCTCTGCTTAAATATTCGGCATGCGGTAATCTTGGCATACTGTTTTATCAATA ACTCTCGTATTACAAAAGCGATTGAGTACATAGAGGGAGAGGAGTGGGAGAATACACCTGTCCCATCAGAAATTAGTGAA CTTGTTGGTGGATTAAGGCAAGATGCTTTCACCCAAGAGCCTGATCGCTAA
Upstream 100 bases:
>100_bases TAGCTGAGTATAATCTAATGTCGGTATATAATCGCAAATGAAACGGTAGCTGATAGAAGAAGTGTTCGTGTCAGAAGAAC ATTAAATAATGGGCAACAAT
Downstream 100 bases:
>100_bases AACAGGAGAAGTGATGGGCATGGGGAAAATGAGGGAATATACAATGCATGCGAGGTAACACCACTGCATCGCTCTAGCAA TGTACCTGATCGGAAGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNLSDIVLDLHPYVADILEVWEDGSSEEFCDAILESIDNDENPQGVRAAFMYLIDRAEYALRRAQTRALSRPMTEHRWIC INEALRAVCSCSSGVRLSSTRQIYFLLHSAILHASFAYFDRGDAPRTIHNDSYNLQDSISFLTSALAVVLRQANKDRANV TRFWDENAIPLLSSLSDSTIYDTFIKAYDRAAQIIMRMQQILQNTGVYSRTRNLCNILHNITILDFRRSGISAALDSDYD SDAEDIVLSIQNDMGFYERLNGLFESFPIRNIGNSNLCLNIRHAVILAYCFINNSRITKAIEYIEGEEWENTPVPSEISE LVGGLRQDAFTQEPDR
Sequences:
>Translated_336_residues MNLSDIVLDLHPYVADILEVWEDGSSEEFCDAILESIDNDENPQGVRAAFMYLIDRAEYALRRAQTRALSRPMTEHRWIC INEALRAVCSCSSGVRLSSTRQIYFLLHSAILHASFAYFDRGDAPRTIHNDSYNLQDSISFLTSALAVVLRQANKDRANV TRFWDENAIPLLSSLSDSTIYDTFIKAYDRAAQIIMRMQQILQNTGVYSRTRNLCNILHNITILDFRRSGISAALDSDYD SDAEDIVLSIQNDMGFYERLNGLFESFPIRNIGNSNLCLNIRHAVILAYCFINNSRITKAIEYIEGEEWENTPVPSEISE LVGGLRQDAFTQEPDR >Mature_336_residues MNLSDIVLDLHPYVADILEVWEDGSSEEFCDAILESIDNDENPQGVRAAFMYLIDRAEYALRRAQTRALSRPMTEHRWIC INEALRAVCSCSSGVRLSSTRQIYFLLHSAILHASFAYFDRGDAPRTIHNDSYNLQDSISFLTSALAVVLRQANKDRANV TRFWDENAIPLLSSLSDSTIYDTFIKAYDRAAQIIMRMQQILQNTGVYSRTRNLCNILHNITILDFRRSGISAALDSDYD SDAEDIVLSIQNDMGFYERLNGLFESFPIRNIGNSNLCLNIRHAVILAYCFINNSRITKAIEYIEGEEWENTPVPSEISE LVGGLRQDAFTQEPDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38245; Mature: 38245
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLSDIVLDLHPYVADILEVWEDGSSEEFCDAILESIDNDENPQGVRAAFMYLIDRAEYA CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRRAQTRALSRPMTEHRWICINEALRAVCSCSSGVRLSSTRQIYFLLHSAILHASFAYFD HHHHHHHHHHCCCHHCCEEEHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHC RGDAPRTIHNDSYNLQDSISFLTSALAVVLRQANKDRANVTRFWDENAIPLLSSLSDSTI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCHHH YDTFIKAYDRAAQIIMRMQQILQNTGVYSRTRNLCNILHNITILDFRRSGISAALDSDYD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEHHCCCHHHHCCCCC SDAEDIVLSIQNDMGFYERLNGLFESFPIRNIGNSNLCLNIRHAVILAYCFINNSRITKA CCHHHEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHH IEYIEGEEWENTPVPSEISELVGGLRQDAFTQEPDR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLSDIVLDLHPYVADILEVWEDGSSEEFCDAILESIDNDENPQGVRAAFMYLIDRAEYA CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRRAQTRALSRPMTEHRWICINEALRAVCSCSSGVRLSSTRQIYFLLHSAILHASFAYFD HHHHHHHHHHCCCHHCCEEEHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHC RGDAPRTIHNDSYNLQDSISFLTSALAVVLRQANKDRANVTRFWDENAIPLLSSLSDSTI CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCCCHHH YDTFIKAYDRAAQIIMRMQQILQNTGVYSRTRNLCNILHNITILDFRRSGISAALDSDYD HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHEEEHHCCCHHHHCCCCC SDAEDIVLSIQNDMGFYERLNGLFESFPIRNIGNSNLCLNIRHAVILAYCFINNSRITKA CCHHHEEEHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHH IEYIEGEEWENTPVPSEISELVGGLRQDAFTQEPDR HHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA