| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607564
Identifier: 88607564
GI number: 88607564
Start: 983631
End: 984767
Strand: Direct
Name: 88607564
Synonym: APH_0919
Alternate gene names: NA
Gene position: 983631-984767 (Clockwise)
Preceding gene: 88607546
Following gene: 88607653
Centisome position: 66.86
GC content: 43.45
Gene sequence:
>1137_bases GTGTCTCGTGTTCCTCAAGTAAAATTGTTTGCTACGGCATACAGGTGTTCAGGGTATGCGTCTAGTTATTTAAGGCACTT GAATATCTATGCAGTTGCTTCAGCTTATCAGTCTGCATATCCGATGTTTTACACAGCAAGGTTTGCCTATAAAAGGGTTA AGCGGGCGTACGCCACATTATTTTGGGGAGATCTTATCGTAATAAGTGTACTGCATGCTTATATATATGCATTCTTCAAG GTCTTAAAACTTTCTTTGGACGATTACAAGGATAAAAAAAAGACAACAAAGATAGCGCTAAAGATAGCGCTATCTGCGCT CATGTTAGTACTGATGCTTATTGTGGTATGTATTATAGTAGTATATCTACTCTTTTCGCTATGTTCGCGCGTTAAGCTTC TCAGAATATGTGTACAGCTTCTCAGAATATGTGTACAGAAAATTTTCAATATCATAGGAAAGTGTTTAGTGGAAGTGTGT GCAGTAATAGCAGCTGCAATACCTGCCGTGCTAGCATGTGTACTGGCATTATACTCTGCCATATTAGCCATCCCCAGCTT GCTGATATCCCTGCCGTTTATGCTGCTTCACGCAACCCTGTTAACCGTCGCGTCTTCCATGAGAGACGTAACATCATTAA CCTTGGAATTTATACGAAGCGCATACCATGTTACGGCTGAGTGGATTCGCAACGTACGCCTACTACAGCTCCCTGGGAAA GTATTGTCATTCCTGTGGAAAATGCTGAAGAGTTTTCTACTTGCATGTTTGTGCTTGGGTATACACCCTGTTGAAGAAGA TGTTTATGATTTGACCGCATTACCAGATCAGAGCAGTGGTAGGAACTCGCAGTGTGGTTTTCTCAGAAATATAATTGCCG TTTCTGTAGGGGCGGTAGTAGCTGTTGTGGCTGGTGTTTTTTCTATTGCTACGACGCTAGTCTCATTATTAGTGCTGCCT ATTGTATTGCTTGGGTTCACTCTCTTTTATCACCCTGACGTCTCATGTGACCGTGAGCGTTCGTCTAGAACAAGGCGCCT CGCAATATGTTTTGATACATCTAATGTACCACGTGAGCCCCATACACAGGCGGCACCCAACGGGGGGGGTCAACGCTGCC AATACAGCGCGATCTAG
Upstream 100 bases:
>100_bases AAAATTTTGTGATACAACGTACGCGCAAGTTACTAGGCTTCTTGTAGTCATCGTGAAAAATTTAACTATAAGCTCATCGG GTGTATAAGGTTACTTTCAA
Downstream 100 bases:
>100_bases TCATGCCACTACGCATGCTAATGAGAATATCAATGTGGCTGCTGGAGCTCAAAGACCTGTGATTGGGGAACGTGTACAGT GGGCAATATCGGTGATAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSRVPQVKLFATAYRCSGYASSYLRHLNIYAVASAYQSAYPMFYTARFAYKRVKRAYATLFWGDLIVISVLHAYIYAFFK VLKLSLDDYKDKKKTTKIALKIALSALMLVLMLIVVCIIVVYLLFSLCSRVKLLRICVQLLRICVQKIFNIIGKCLVEVC AVIAAAIPAVLACVLALYSAILAIPSLLISLPFMLLHATLLTVASSMRDVTSLTLEFIRSAYHVTAEWIRNVRLLQLPGK VLSFLWKMLKSFLLACLCLGIHPVEEDVYDLTALPDQSSGRNSQCGFLRNIIAVSVGAVVAVVAGVFSIATTLVSLLVLP IVLLGFTLFYHPDVSCDRERSSRTRRLAICFDTSNVPREPHTQAAPNGGGQRCQYSAI
Sequences:
>Translated_378_residues MSRVPQVKLFATAYRCSGYASSYLRHLNIYAVASAYQSAYPMFYTARFAYKRVKRAYATLFWGDLIVISVLHAYIYAFFK VLKLSLDDYKDKKKTTKIALKIALSALMLVLMLIVVCIIVVYLLFSLCSRVKLLRICVQLLRICVQKIFNIIGKCLVEVC AVIAAAIPAVLACVLALYSAILAIPSLLISLPFMLLHATLLTVASSMRDVTSLTLEFIRSAYHVTAEWIRNVRLLQLPGK VLSFLWKMLKSFLLACLCLGIHPVEEDVYDLTALPDQSSGRNSQCGFLRNIIAVSVGAVVAVVAGVFSIATTLVSLLVLP IVLLGFTLFYHPDVSCDRERSSRTRRLAICFDTSNVPREPHTQAAPNGGGQRCQYSAI >Mature_377_residues SRVPQVKLFATAYRCSGYASSYLRHLNIYAVASAYQSAYPMFYTARFAYKRVKRAYATLFWGDLIVISVLHAYIYAFFKV LKLSLDDYKDKKKTTKIALKIALSALMLVLMLIVVCIIVVYLLFSLCSRVKLLRICVQLLRICVQKIFNIIGKCLVEVCA VIAAAIPAVLACVLALYSAILAIPSLLISLPFMLLHATLLTVASSMRDVTSLTLEFIRSAYHVTAEWIRNVRLLQLPGKV LSFLWKMLKSFLLACLCLGIHPVEEDVYDLTALPDQSSGRNSQCGFLRNIIAVSVGAVVAVVAGVFSIATTLVSLLVLPI VLLGFTLFYHPDVSCDRERSSRTRRLAICFDTSNVPREPHTQAAPNGGGQRCQYSAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41954; Mature: 41823
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVPQVKLFATAYRCSGYASSYLRHLNIYAVASAYQSAYPMFYTARFAYKRVKRAYATL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FWGDLIVISVLHAYIYAFFKVLKLSLDDYKDKKKTTKIALKIALSALMLVLMLIVVCIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLLFSLCSRVKLLRICVQLLRICVQKIFNIIGKCLVEVCAVIAAAIPAVLACVLALYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAIPSLLISLPFMLLHATLLTVASSMRDVTSLTLEFIRSAYHVTAEWIRNVRLLQLPGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH VLSFLWKMLKSFLLACLCLGIHPVEEDVYDLTALPDQSSGRNSQCGFLRNIIAVSVGAVV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AVVAGVFSIATTLVSLLVLPIVLLGFTLFYHPDVSCDRERSSRTRRLAICFDTSNVPREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEECCCCCCCC HTQAAPNGGGQRCQYSAI CCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRVPQVKLFATAYRCSGYASSYLRHLNIYAVASAYQSAYPMFYTARFAYKRVKRAYATL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH FWGDLIVISVLHAYIYAFFKVLKLSLDDYKDKKKTTKIALKIALSALMLVLMLIVVCIIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYLLFSLCSRVKLLRICVQLLRICVQKIFNIIGKCLVEVCAVIAAAIPAVLACVLALYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAIPSLLISLPFMLLHATLLTVASSMRDVTSLTLEFIRSAYHVTAEWIRNVRLLQLPGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHH VLSFLWKMLKSFLLACLCLGIHPVEEDVYDLTALPDQSSGRNSQCGFLRNIIAVSVGAVV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH AVVAGVFSIATTLVSLLVLPIVLLGFTLFYHPDVSCDRERSSRTRRLAICFDTSNVPREP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEECCCCCCCC HTQAAPNGGGQRCQYSAI CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA