Click here to switch to the map view.

The map label for this gene is 88607501

Identifier: 88607501

GI number: 88607501

Start: 11486

End: 12109

Strand: Reverse

Name: 88607501

Synonym: APH_0011

Alternate gene names: NA

Gene position: 12109-11486 (Counterclockwise)

Preceding gene: 88607335

Following gene: 88607550

Centisome position: 0.82

GC content: 34.13

Gene sequence:

>624_bases
ATGCCGATATTCAGACTCATGATGCTTTCTTATTTTTTACTTAACTTCGATAAGATTTGTGCAAGAATATTTTATGTAGC
GATTTACACCTACATAGTTTCCATTGCTCTAGTTTTGTGTCATGAGGGGGCAGCTAGCCTTGTGTATTCTAAAAATCCCC
TTTATCTATATCCCAGGGTTTATCAAATACTAAAGTGGTACTGTTTTAATAGGGATTTAATCACCACAGGTATGATAATC
CGTGCGGTGATGATTATGTTTTGTACGCATCTTGTACAAAGTTACATATGGGGTTTGAAGTGGCGTTCATTACCTAATGT
TGTTTTTCGTTACTTGTCTTCAAATATTTTTAATTCGAAAGGTGGTTTAGTTTCTAATAATACCAGAATGGTGTTTCCTG
CAGAAATAGAGCATGAAAAAGACATATTTATAAAAGGAGTAGAAGAGAGTACAGAAGAGCTCATTGTTGATTTACTCAAC
TATCATGTTTCTGAGATTACTAGCGATGATCTGATAAATCTCAAGAAGGTTTGTGCTATAAAAATTGGATACGCAATGGA
AGATATGATTAGGAATTTAGTCAAGATCAAGGCACAAACTAGTGATACAAAACCTAAGGATTAG

Upstream 100 bases:

>100_bases
AACGGTTTTTGGTACCGTTATGCGGAGGTTCGATTCCTCCCATCCCAGCGCTTTTTTTGGGTTCTGAATTTTAGTGGTAA
AATAGAGAAGTTATAAGCAC

Downstream 100 bases:

>100_bases
AAGGTAGACTAAAGATTTATTATTACGGCAAATGAAGCTTTTAAAGTGAACTTCTGCTTATATGTAGACTATTGTTCAAT
GAAATTCCCGTTTATGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MPIFRLMMLSYFLLNFDKICARIFYVAIYTYIVSIALVLCHEGAASLVYSKNPLYLYPRVYQILKWYCFNRDLITTGMII
RAVMIMFCTHLVQSYIWGLKWRSLPNVVFRYLSSNIFNSKGGLVSNNTRMVFPAEIEHEKDIFIKGVEESTEELIVDLLN
YHVSEITSDDLINLKKVCAIKIGYAMEDMIRNLVKIKAQTSDTKPKD

Sequences:

>Translated_207_residues
MPIFRLMMLSYFLLNFDKICARIFYVAIYTYIVSIALVLCHEGAASLVYSKNPLYLYPRVYQILKWYCFNRDLITTGMII
RAVMIMFCTHLVQSYIWGLKWRSLPNVVFRYLSSNIFNSKGGLVSNNTRMVFPAEIEHEKDIFIKGVEESTEELIVDLLN
YHVSEITSDDLINLKKVCAIKIGYAMEDMIRNLVKIKAQTSDTKPKD
>Mature_206_residues
PIFRLMMLSYFLLNFDKICARIFYVAIYTYIVSIALVLCHEGAASLVYSKNPLYLYPRVYQILKWYCFNRDLITTGMIIR
AVMIMFCTHLVQSYIWGLKWRSLPNVVFRYLSSNIFNSKGGLVSNNTRMVFPAEIEHEKDIFIKGVEESTEELIVDLLNY
HVSEITSDDLINLKKVCAIKIGYAMEDMIRNLVKIKAQTSDTKPKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24082; Mature: 23951

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIFRLMMLSYFLLNFDKICARIFYVAIYTYIVSIALVLCHEGAASLVYSKNPLYLYPRV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCEECHHH
YQILKWYCFNRDLITTGMIIRAVMIMFCTHLVQSYIWGLKWRSLPNVVFRYLSSNIFNSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
GGLVSNNTRMVFPAEIEHEKDIFIKGVEESTEELIVDLLNYHVSEITSDDLINLKKVCAI
CCEEECCCEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KIGYAMEDMIRNLVKIKAQTSDTKPKD
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PIFRLMMLSYFLLNFDKICARIFYVAIYTYIVSIALVLCHEGAASLVYSKNPLYLYPRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCEECHHH
YQILKWYCFNRDLITTGMIIRAVMIMFCTHLVQSYIWGLKWRSLPNVVFRYLSSNIFNSK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
GGLVSNNTRMVFPAEIEHEKDIFIKGVEESTEELIVDLLNYHVSEITSDDLINLKKVCAI
CCEEECCCEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KIGYAMEDMIRNLVKIKAQTSDTKPKD
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA