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The map label for this gene is yrbD [C]

Identifier: 88607489

GI number: 88607489

Start: 47382

End: 47834

Strand: Reverse

Name: yrbD [C]

Synonym: APH_0045

Alternate gene names: 88607489

Gene position: 47834-47382 (Counterclockwise)

Preceding gene: 88607516

Following gene: 88607870

Centisome position: 3.25

GC content: 46.58

Gene sequence:

>453_bases
ATGTCCAAATGCAGTATAATAGAGGTGCTCGTAGGGGTTTTTGTATCGGTTGTTGTAATAGCCCTGGGTAGCTTCATGCT
CAACCGACTCTCCCATCAGGTACGCTTTTACAATAGGTGTAACCTCGTCACCGCCTCGTTCTCTGACGTCAATGGCTTGA
GGGTGGGGAGCGATGTGCGTGTTTCTGGTGTCAATATCGGCAGCGTTACTGCCATGTCTTTGGACTCCGATAACCTTCCA
GTAGTTACGTTGTGCATACATAAAGGCCTGCTGTTACCTGTAGACAGCTCCGCCTCCATTACTTATGCAGATCTACTAGG
AAAGAGGTACATAGATATAATTCCTGGAGCTGACGACAATGTGTTAGAAGATGGTTCTTCACTTGCTCACACCAGTACAG
TGGCTAGCCCAGGCATCATTATAAACAGCCTTATAAGTAATGCACTGAAGTAG

Upstream 100 bases:

>100_bases
TGTATCGTGGGGTTTGTAGCAGACGTGCACTTCACTTTATACAGATTTGTGTATCGCTTGTTAGTGCTTCGCTTTAACGG
GTTTAGCAGATTAGGTAAAT

Downstream 100 bases:

>100_bases
TGCAAAACCTCAATATCAATCCTAATTTAGAAACATGAATTTCAGAAACTTATAAAAATATGAGAGAAGAGCATGCTCTT
CTCTCAACAGCGCGGTGCCT

Product: mce-related protein

Products: NA

Alternate protein names: Mce-Related Protein; Conserved Family Protein; Virulence Factor Mce Family Protein; ABC Transporter; Cell Entry-Like Protein; Luene Tolerance Protein; Luene Transport System Ttg2C Protein; Mammalian Cell Entry Related Protein

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSKCSIIEVLVGVFVSVVVIALGSFMLNRLSHQVRFYNRCNLVTASFSDVNGLRVGSDVRVSGVNIGSVTAMSLDSDNLP
VVTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDNVLEDGSSLAHTSTVASPGIIINSLISNALK

Sequences:

>Translated_150_residues
MSKCSIIEVLVGVFVSVVVIALGSFMLNRLSHQVRFYNRCNLVTASFSDVNGLRVGSDVRVSGVNIGSVTAMSLDSDNLP
VVTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDNVLEDGSSLAHTSTVASPGIIINSLISNALK
>Mature_149_residues
SKCSIIEVLVGVFVSVVVIALGSFMLNRLSHQVRFYNRCNLVTASFSDVNGLRVGSDVRVSGVNIGSVTAMSLDSDNLPV
VTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDNVLEDGSSLAHTSTVASPGIIINSLISNALK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15806; Mature: 15675

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKCSIIEVLVGVFVSVVVIALGSFMLNRLSHQVRFYNRCNLVTASFSDVNGLRVGSDVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCEE
VSGVNIGSVTAMSLDSDNLPVVTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDN
EECCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCHHHHHHCCHHEEEECCCCCC
VLEDGSSLAHTSTVASPGIIINSLISNALK
HHHCCCCHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SKCSIIEVLVGVFVSVVVIALGSFMLNRLSHQVRFYNRCNLVTASFSDVNGLRVGSDVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEECCCEE
VSGVNIGSVTAMSLDSDNLPVVTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDN
EECCCCCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCHHHHHHCCHHEEEECCCCCC
VLEDGSSLAHTSTVASPGIIINSLISNALK
HHHCCCCHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA