| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607243
Identifier: 88607243
GI number: 88607243
Start: 820890
End: 821363
Strand: Reverse
Name: 88607243
Synonym: APH_0775
Alternate gene names: NA
Gene position: 821363-820890 (Counterclockwise)
Preceding gene: 88607629
Following gene: 88607779
Centisome position: 55.83
GC content: 39.66
Gene sequence:
>474_bases ATGGGTGATTTAGTAGATTATCGCAAGTTAGTATATTCTGCAATGTGCGGTGTTGTGAGGGAGGCTATGTCCTTCTTTTC TAAGCTCTCGCCTACCAGAGATGTTCATGTCGCCGTTTCTTTTGTGACGAATTGCAGTGGTGTTGTTCTTCCTGATTATC TAAGGATACAGTACCCTGAGAGCATGACTATAGTTCTGCAATATCAGTTCCGTGAGCTAAACGTTAGTGAGAATGGCTTT AGTGTTGTGCTTAGCTTTAGGGGTAAGGAAGAGCTCATTACAGTACCTTTTAGAGCTATAGTTAAGTACGTTGATATGAT ATCAAACTTCTCGCTTGATTTAGAGCAATACGGCGATATAGAGCTAGAGATGGGAATGGATTCCGACAATGACGATGATC TTGATGAGGATATAGTGTCATCGCATACAACCCAGGACAACATTATTTTTATTGATAAGTTTAGAAAGAATTAA
Upstream 100 bases:
>100_bases TATTTTAGCGACTGTATTTATTTATGGTATAATGGCAAGCTCTGCTCTATATGAGTATAACCCTTAGGGGATAACTGCAT TTATATGCGTGAGAGGTTAT
Downstream 100 bases:
>100_bases GCGTATAGCATTCTGGGGAATGGGCTATGTTTTCGAGAGAGCAGTGTTGGGACAGGCTTTGTAGTTTCTGAAGTCTCCAA TGGGAGAAGGGGCAGCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MGDLVDYRKLVYSAMCGVVREAMSFFSKLSPTRDVHVAVSFVTNCSGVVLPDYLRIQYPESMTIVLQYQFRELNVSENGF SVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDIELEMGMDSDNDDDLDEDIVSSHTTQDNIIFIDKFRKN
Sequences:
>Translated_157_residues MGDLVDYRKLVYSAMCGVVREAMSFFSKLSPTRDVHVAVSFVTNCSGVVLPDYLRIQYPESMTIVLQYQFRELNVSENGF SVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDIELEMGMDSDNDDDLDEDIVSSHTTQDNIIFIDKFRKN >Mature_156_residues GDLVDYRKLVYSAMCGVVREAMSFFSKLSPTRDVHVAVSFVTNCSGVVLPDYLRIQYPESMTIVLQYQFRELNVSENGFS VVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDIELEMGMDSDNDDDLDEDIVSSHTTQDNIIFIDKFRKN
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17994; Mature: 17862
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLVDYRKLVYSAMCGVVREAMSFFSKLSPTRDVHVAVSFVTNCSGVVLPDYLRIQYPE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCEEEEECCC SMTIVLQYQFRELNVSENGFSVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDI CEEEEEEEEEEEECCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCCHHHCCCE ELEMGMDSDNDDDLDEDIVSSHTTQDNIIFIDKFRKN EEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCC >Mature Secondary Structure GDLVDYRKLVYSAMCGVVREAMSFFSKLSPTRDVHVAVSFVTNCSGVVLPDYLRIQYPE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEECCEEEEECCC SMTIVLQYQFRELNVSENGFSVVLSFRGKEELITVPFRAIVKYVDMISNFSLDLEQYGDI CEEEEEEEEEEEECCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHCCCCCHHHCCCE ELEMGMDSDNDDDLDEDIVSSHTTQDNIIFIDKFRKN EEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA