Definition Anaplasma phagocytophilum HZ, complete genome.
Accession NC_007797
Length 1,471,282

Click here to switch to the map view.

The map label for this gene is 88607160

Identifier: 88607160

GI number: 88607160

Start: 1201962

End: 1202060

Strand: Reverse

Name: 88607160

Synonym: APH_1141

Alternate gene names: NA

Gene position: 1202060-1201962 (Counterclockwise)

Preceding gene: 88607723

Following gene: 88607663

Centisome position: 81.7

GC content: 49.49

Gene sequence:

>99_bases
TTGTCGTATGGTGCACTGATGCAGATGGCTATTGTTGCTCTTTCAAAGAAGGCAGCGGCGTTACCTCATGGATTGCCCAG
CACTGTCATCAGAAGCTAG

Upstream 100 bases:

>100_bases
AGCATTTTGTATCGCGTTTAAGAGTGTGTAACGGCATTTTGGATTTGTGACATAACTCCTCTTGGTACGTGGTTAATGAT
AATAGAGCGGTCATGCAATA

Downstream 100 bases:

>100_bases
AGTGACTTCAGGTAACTACTGGCTGACTGCACTAACTCCTATCAGTGGGGCGATCACAGCAAGTGCTGCTATAGATCTTG
AAGACCACAATCTATATACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 32; Mature: 31

Protein sequence:

>32_residues
MSYGALMQMAIVALSKKAAALPHGLPSTVIRS

Sequences:

>Translated_32_residues
MSYGALMQMAIVALSKKAAALPHGLPSTVIRS
>Mature_31_residues
SYGALMQMAIVALSKKAAALPHGLPSTVIRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3314; Mature: 3183

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.4 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYGALMQMAIVALSKKAAALPHGLPSTVIRS
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
SYGALMQMAIVALSKKAAALPHGLPSTVIRS
CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA