| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88606957
Identifier: 88606957
GI number: 88606957
Start: 764196
End: 764975
Strand: Reverse
Name: 88606957
Synonym: APH_0723
Alternate gene names: NA
Gene position: 764975-764196 (Counterclockwise)
Preceding gene: 88607809
Following gene: 88607676
Centisome position: 51.99
GC content: 41.92
Gene sequence:
>780_bases ATGGCTAATAATAATGATAAGGCTCAGAAAGGACAAGCTGTTAAAACTCAACAGAGCAATGTTACTGTAGAAGGAGATGC ACCTCAACAGAGTGCAGTTCCTGCAGCTGGGGTTGTAGAAGAACAGAAGAGTACTGTTTCTGCGGGACAAAGTAGTGATT CTACAAATAATACTAGGAGAAGAGGGTATATAGTTATTTCATCTATCATCCTCGTACTTAGTATTCTTTGTGTTGCTGCA TCGATCTATCTATATCTCCATCAGATGCATGCAATGATTCTAAATCCGAAAACAATATATTGTATTGTTGGAGCGGGAGC ACTTGCGCTCTGTTGTGGAGTATTGTCTCTGTGGAAATTGATTGCAGAGTGTAAAAAAGGCAAAGACAGCCCAGATGTTT CTGCTGTAGCATCAAGTGCTACAGCTGCTGAATCCAGGGTATCAGTTGACTCTACAGGATCAGAGGCATCAGTTGCCTCT ACAAGATCAGCGGAAACAGATCGTGGAATTAAAGAGCTGTCTGAGAATATACAAAAACTCTCGCTTGATATGAAGGAAAC AAAAGAAGTAATACAAATGATGGAAAGACGTCTCATGACCTTGCTTTCAGAGAATGATATTGCGGAAAAATGCTCTACTT TCTTGAAAGCCGCATTGCAAAAGTTAGAAGTTGGGGATTTTGATGAATTATCATCATCAGCTGCTCCGGGTACAGAGGTT AAGGTCAGAGATGCGGTGGTAGGTAGCGGCGGCGCTAAAGCCACGACGGTAGCTGCATAA
Upstream 100 bases:
>100_bases ATCCTTAACCTACGTTAATTTTTTTGTTGCTATGGAGGGAGGGCACGGGTTCGCGTATTCATATAGAATTTAATATTAAT ATTTTAAAAGGTATTTATCT
Downstream 100 bases:
>100_bases GAATCCATTAAATTAATTATATTTCTGCATTAAAGTTTTTAGTATATTTACCAAATTTGGCCCGCTCTATATTTTTTGTA GTAGCGGGCCTATAGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MANNNDKAQKGQAVKTQQSNVTVEGDAPQQSAVPAAGVVEEQKSTVSAGQSSDSTNNTRRRGYIVISSIILVLSILCVAA SIYLYLHQMHAMILNPKTIYCIVGAGALALCCGVLSLWKLIAECKKGKDSPDVSAVASSATAAESRVSVDSTGSEASVAS TRSAETDRGIKELSENIQKLSLDMKETKEVIQMMERRLMTLLSENDIAEKCSTFLKAALQKLEVGDFDELSSSAAPGTEV KVRDAVVGSGGAKATTVAA
Sequences:
>Translated_259_residues MANNNDKAQKGQAVKTQQSNVTVEGDAPQQSAVPAAGVVEEQKSTVSAGQSSDSTNNTRRRGYIVISSIILVLSILCVAA SIYLYLHQMHAMILNPKTIYCIVGAGALALCCGVLSLWKLIAECKKGKDSPDVSAVASSATAAESRVSVDSTGSEASVAS TRSAETDRGIKELSENIQKLSLDMKETKEVIQMMERRLMTLLSENDIAEKCSTFLKAALQKLEVGDFDELSSSAAPGTEV KVRDAVVGSGGAKATTVAA >Mature_258_residues ANNNDKAQKGQAVKTQQSNVTVEGDAPQQSAVPAAGVVEEQKSTVSAGQSSDSTNNTRRRGYIVISSIILVLSILCVAAS IYLYLHQMHAMILNPKTIYCIVGAGALALCCGVLSLWKLIAECKKGKDSPDVSAVASSATAAESRVSVDSTGSEASVAST RSAETDRGIKELSENIQKLSLDMKETKEVIQMMERRLMTLLSENDIAEKCSTFLKAALQKLEVGDFDELSSSAAPGTEVK VRDAVVGSGGAKATTVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27217; Mature: 27086
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANNNDKAQKGQAVKTQQSNVTVEGDAPQQSAVPAAGVVEEQKSTVSAGQSSDSTNNTRR CCCCCCCHHCCCCCEECCCCEEEECCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHH RGYIVISSIILVLSILCVAASIYLYLHQMHAMILNPKTIYCIVGAGALALCCGVLSLWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH IAECKKGKDSPDVSAVASSATAAESRVSVDSTGSEASVASTRSAETDRGIKELSENIQKL HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH SLDMKETKEVIQMMERRLMTLLSENDIAEKCSTFLKAALQKLEVGDFDELSSSAAPGTEV HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCE KVRDAVVGSGGAKATTVAA EEHHHEECCCCCCCCCCCC >Mature Secondary Structure ANNNDKAQKGQAVKTQQSNVTVEGDAPQQSAVPAAGVVEEQKSTVSAGQSSDSTNNTRR CCCCCCHHCCCCCEECCCCEEEECCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHH RGYIVISSIILVLSILCVAASIYLYLHQMHAMILNPKTIYCIVGAGALALCCGVLSLWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH IAECKKGKDSPDVSAVASSATAAESRVSVDSTGSEASVASTRSAETDRGIKELSENIQKL HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH SLDMKETKEVIQMMERRLMTLLSENDIAEKCSTFLKAALQKLEVGDFDELSSSAAPGTEV HCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCE KVRDAVVGSGGAKATTVAA EEHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA