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The map label for this gene is p44-53 [H]

Identifier: 88606845

GI number: 88606845

Start: 1219544

End: 1220803

Strand: Reverse

Name: p44-53 [H]

Synonym: APH_1155

Alternate gene names: 88606845

Gene position: 1220803-1219544 (Counterclockwise)

Preceding gene: 88607540

Following gene: 88607935

Centisome position: 82.98

GC content: 45.87

Gene sequence:

>1260_bases
ATGTGTTTTCTAAGCTGTAAACCACACCCAAGCACTGCGGTTATTAGAAGTAAGCTATTATTAGGAAGCGTAATGATGTC
GATGGCTATAGTCATGGCTGGGAATGATGTCAGGGCTCATGATGACGTTAGCGCTTTGGATACTGGTGGAGCGGGATATT
TCTATGTTGGCTTGGATTACAGTCCAGCGTTTAGCAAGATAAGAGATTTTAGTATAAGGGAGAGTAACGGAGAGACTAAG
GCAGTATATCCATACTTAAAGGATGGAAAGAGTGTAAAGCTAGAGTCACACAAGTTTGACTGGAACACTCCTGATCCTCG
GATTGGGTTTAAGGACAACATGCTTGTAGCTATGGAAGGCAGTGTTGGGTACGGTATTGGTGGTGCCAGGGTTGAGCTTG
AGATTGGTTACGAGCGCTTCAAGACCAAGGGTATTAGAGATAGTGGTAGTAAGGAAGATGAAGCAGATACAGTATATCTA
CTAGCTAAGGAGTTAGCTTATGATGTTGTTACTGGACAAACTGATAAGCTTACCGCTGCTCTTGCCAAAACCTCAGGTAA
GGACATCGTTCAGTTTGCTAAGGCGGTTGGAATTTCCCACCCTACCATTGATGGGAAGGTTTGTAGGACGAAGAAGCCGA
GTAGCGGCAGCAATACATATTTTGGGAAGTATGGTGAGGAGACGGATAACGGGAGCAGCGGTGAGGGTGTAGTAGCGGTG
TGTGGAGCGATGTCGGAGAACACTAGCACGAGCAAGGGGTCGGTCACTGCGCAAACTTTGGGGGACTTTGTCAGTGTTAC
GCTAAAAGGAGATGGTAGTAAGAATTGGCCAACATCGACGACGAAAAGTAGCAAGGTGCCAGCAGCTGTCACCAACGACA
ACGCCAAAGCCGTAGCCGGAGACCTAACAAAACTAACCCCCGAAGAAAAAACCATAGTAGCAGGGTTATTAGCTAAAACT
ATTGAAGGGGGTGAGGTTGTAGAAATTAGGGCAGTTTCTTCTACTTCTGTGATGGTTAATGCTTGTTATGATCTTCTTAG
TGAAGGCTTAGGTGTCGTTCCTTATGCTTGCGTCGGTCTTGGTGGTAACTTCGTGGGCGTTGTTGATGGGCATATCACTC
CTAAGCTTGCTTATAGATTAAAGGCTGGGTTGAGTTATCAGCTCTCTCCTGAAATCTCGGCTTTTGCTGGGGGTTTCTAC
CATCGTGTTGTGGGAGATGGTGTTTATGATGATCTTCCAGCTCAACTACCTACAAATTGA

Upstream 100 bases:

>100_bases
TTTTCTGAGACATTAGGAAGTTACACCTATAGAATCTAACAGGGAAGGTGTTGCCTCTATGGTCCAATGAAGATCTCTTT
CAGTTTCAAAACATTGGTGA

Downstream 100 bases:

>100_bases
TAGGTACACTAAAAGCCCACGTAATAACTCTCATTATTAAAATGAGGAAGATGAAGCAGATACAGTATATCTACTAGCTA
AGGAGTTAGCTTATGATGTT

Product: P44-53 outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MCFLSCKPHPSTAVIRSKLLLGSVMMSMAIVMAGNDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETK
AVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYL
LAKELAYDVVTGQTDKLTAALAKTSGKDIVQFAKAVGISHPTIDGKVCRTKKPSSGSNTYFGKYGEETDNGSSGEGVVAV
CGAMSENTSTSKGSVTAQTLGDFVSVTLKGDGSKNWPTSTTKSSKVPAAVTNDNAKAVAGDLTKLTPEEKTIVAGLLAKT
IEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFY
HRVVGDGVYDDLPAQLPTN

Sequences:

>Translated_419_residues
MCFLSCKPHPSTAVIRSKLLLGSVMMSMAIVMAGNDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETK
AVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYL
LAKELAYDVVTGQTDKLTAALAKTSGKDIVQFAKAVGISHPTIDGKVCRTKKPSSGSNTYFGKYGEETDNGSSGEGVVAV
CGAMSENTSTSKGSVTAQTLGDFVSVTLKGDGSKNWPTSTTKSSKVPAAVTNDNAKAVAGDLTKLTPEEKTIVAGLLAKT
IEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFY
HRVVGDGVYDDLPAQLPTN
>Mature_419_residues
MCFLSCKPHPSTAVIRSKLLLGSVMMSMAIVMAGNDVRAHDDVSALDTGGAGYFYVGLDYSPAFSKIRDFSIRESNGETK
AVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEGSVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYL
LAKELAYDVVTGQTDKLTAALAKTSGKDIVQFAKAVGISHPTIDGKVCRTKKPSSGSNTYFGKYGEETDNGSSGEGVVAV
CGAMSENTSTSKGSVTAQTLGDFVSVTLKGDGSKNWPTSTTKSSKVPAAVTNDNAKAVAGDLTKLTPEEKTIVAGLLAKT
IEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGLGGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFY
HRVVGDGVYDDLPAQLPTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 44195; Mature: 44195

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFLSCKPHPSTAVIRSKLLLGSVMMSMAIVMAGNDVRAHDDVSALDTGGAGYFYVGLDY
CEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHCCCCCEEEEEEECC
SPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEG
CHHHHHHHCCEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEC
SVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAA
CCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHH
LAKTSGKDIVQFAKAVGISHPTIDGKVCRTKKPSSGSNTYFGKYGEETDNGSSGEGVVAV
HHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
CGAMSENTSTSKGSVTAQTLGDFVSVTLKGDGSKNWPTSTTKSSKVPAAVTNDNAKAVAG
EECCCCCCCCCCCCEEHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEC
DLTKLTPEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGL
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEEC
GGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQLPTN
CCCEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCFLSCKPHPSTAVIRSKLLLGSVMMSMAIVMAGNDVRAHDDVSALDTGGAGYFYVGLDY
CEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHCCCCCEEEEEEECC
SPAFSKIRDFSIRESNGETKAVYPYLKDGKSVKLESHKFDWNTPDPRIGFKDNMLVAMEG
CHHHHHHHCCEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEC
SVGYGIGGARVELEIGYERFKTKGIRDSGSKEDEADTVYLLAKELAYDVVTGQTDKLTAA
CCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHHHHHH
LAKTSGKDIVQFAKAVGISHPTIDGKVCRTKKPSSGSNTYFGKYGEETDNGSSGEGVVAV
HHHCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
CGAMSENTSTSKGSVTAQTLGDFVSVTLKGDGSKNWPTSTTKSSKVPAAVTNDNAKAVAG
EECCCCCCCCCCCCEEHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEC
DLTKLTPEEKTIVAGLLAKTIEGGEVVEIRAVSSTSVMVNACYDLLSEGLGVVPYACVGL
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHEEEC
GGNFVGVVDGHITPKLAYRLKAGLSYQLSPEISAFAGGFYHRVVGDGVYDDLPAQLPTN
CCCEEEEECCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8294020 [H]