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The map label for this gene is smf [H]

Identifier: 88606798

GI number: 88606798

Start: 997990

End: 999024

Strand: Direct

Name: smf [H]

Synonym: APH_0933

Alternate gene names: 88606798

Gene position: 997990-999024 (Clockwise)

Preceding gene: 88606978

Following gene: 88607149

Centisome position: 67.83

GC content: 43.48

Gene sequence:

>1035_bases
ATGTTCAGGAAGCTTTTAGAGCTGTATAAAAGCCCTAGAAAGGCGTTAGAGGCTTTGCATGAGGGTGCATGCAGGGATAT
AGCAACTGTTTGCTCAGTATATGATGCTGAAAAGGAAATTGAATTTTGTAGGCGCATTGGCGCAAGAATAATCGACATAT
TCGACAAGCAATACCCAAAAATGCTCTCCAATATATTTGATCCCCCGCCCGTCATTACTGTATTGGGTAACGAAGACCTG
CTCCAAAGTCCACGCACCGTGGCTATAGTGGGGAGCCGAGATGCGTCGGCTAATAGCATTAGGCTAGCGTACGAGTTATC
TCTCGAGCTATCTCAAATGAATTTCGTTACAGTATCGGGATTGGCCCGAGGTGTTGATAGCGCTGTACACAGCGTTGCGT
ATCATGGCAAACCAACGATAGCAGTTATAGCAAATGGAATAAATGTCATATATCCGAGGGAGAACGCCAAACTATATAAG
TCAATTGTTCGTGAAGGTGGATTATTAATTTCTGAACTACCATTTTCTGCTATTCCTAAAGCAAGTTTGTTTCCTCAGCG
CAATCGCATAATTTCTGGGTTATCTCTATGTGTTGTCGTCGTGGAAGCATCTAAGAAGTCTGGATCTCTGATCACAGCAA
ATTTTGCTCTTTCACAAGGTAGAGAAGTGTTTGCTGTACCGGGGTCACCTTTGGATAGCAGGTGTGCAGGTAGCAATGAT
TTAATAAAGCAAGGCGCCTACTTAATTGAGTCTGCCACGGATATCATAAGTGTTCTTGGTTTCTCCGGCATGACTGGTAT
GGAGCACGCATTACGTGATACGCAAAAACGCACCTCAAAAAATACTACCACGACTCCTGTACAAGATCTTATCCTAAAAA
ATCTCAGTATTTCACCAACAAACATTGATGATCTTGTTATCTGCTGTAACCTGGATGTAAGCGTGCTCTTGGCCGCTTTG
TTAGAGCTAGAACTTGCTGGTAGAGTAGAAAGACTCCCGGGGAACAGATTTGCACTAATCGCAACATTCTCCTAG

Upstream 100 bases:

>100_bases
AGCAATTTATCTATAGGCTACCATGAACGATGCCTTAATAACCGAAAGCACATTGATTGATTGTCTTAGATTAGCTCGAA
CACCCGGAGTAGGGCCTGTA

Downstream 100 bases:

>100_bases
CGTTGTGAGCTCACTACCCTGTCAAAAACACGGATAAATTTATAGTAAGGGTAAGTGCGGCAAAGAGAAGGGATATGTCC
TCTATGAAGTGAATACACAG

Product: putative DNA processing protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARIIDIFDKQYPKMLSNIFDPPPVITVLGNEDL
LQSPRTVAIVGSRDASANSIRLAYELSLELSQMNFVTVSGLARGVDSAVHSVAYHGKPTIAVIANGINVIYPRENAKLYK
SIVREGGLLISELPFSAIPKASLFPQRNRIISGLSLCVVVVEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSND
LIKQGAYLIESATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPTNIDDLVICCNLDVSVLLAAL
LELELAGRVERLPGNRFALIATFS

Sequences:

>Translated_344_residues
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARIIDIFDKQYPKMLSNIFDPPPVITVLGNEDL
LQSPRTVAIVGSRDASANSIRLAYELSLELSQMNFVTVSGLARGVDSAVHSVAYHGKPTIAVIANGINVIYPRENAKLYK
SIVREGGLLISELPFSAIPKASLFPQRNRIISGLSLCVVVVEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSND
LIKQGAYLIESATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPTNIDDLVICCNLDVSVLLAAL
LELELAGRVERLPGNRFALIATFS
>Mature_344_residues
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARIIDIFDKQYPKMLSNIFDPPPVITVLGNEDL
LQSPRTVAIVGSRDASANSIRLAYELSLELSQMNFVTVSGLARGVDSAVHSVAYHGKPTIAVIANGINVIYPRENAKLYK
SIVREGGLLISELPFSAIPKASLFPQRNRIISGLSLCVVVVEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSND
LIKQGAYLIESATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPTNIDDLVICCNLDVSVLLAAL
LELELAGRVERLPGNRFALIATFS

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=279, Percent_Identity=39.0681003584229, Blast_Score=165, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 37324; Mature: 37324

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARIIDIFDKQYPK
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MLSNIFDPPPVITVLGNEDLLQSPRTVAIVGSRDASANSIRLAYELSLELSQMNFVTVSG
HHHHHCCCCCEEEEECCHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEHHCCEEEHHH
LARGVDSAVHSVAYHGKPTIAVIANGINVIYPRENAKLYKSIVREGGLLISELPFSAIPK
HHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCC
ASLFPQRNRIISGLSLCVVVVEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSND
CCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHH
LIKQGAYLIESATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPT
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
NIDDLVICCNLDVSVLLAALLELELAGRVERLPGNRFALIATFS
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MFRKLLELYKSPRKALEALHEGACRDIATVCSVYDAEKEIEFCRRIGARIIDIFDKQYPK
CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MLSNIFDPPPVITVLGNEDLLQSPRTVAIVGSRDASANSIRLAYELSLELSQMNFVTVSG
HHHHHCCCCCEEEEECCHHHHCCCCEEEEEECCCCCCCEEEEEEEEEEEEHHCCEEEHHH
LARGVDSAVHSVAYHGKPTIAVIANGINVIYPRENAKLYKSIVREGGLLISELPFSAIPK
HHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCEEEECCCCCCCCC
ASLFPQRNRIISGLSLCVVVVEASKKSGSLITANFALSQGREVFAVPGSPLDSRCAGSND
CCCCCCHHHHHHHHHEEEEEEECCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHH
LIKQGAYLIESATDIISVLGFSGMTGMEHALRDTQKRTSKNTTTTPVQDLILKNLSISPT
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
NIDDLVICCNLDVSVLLAALLELELAGRVERLPGNRFALIATFS
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]