| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88606788
Identifier: 88606788
GI number: 88606788
Start: 865206
End: 867134
Strand: Direct
Name: 88606788
Synonym: APH_0815
Alternate gene names: NA
Gene position: 865206-867134 (Clockwise)
Preceding gene: 88607486
Following gene: 88607357
Centisome position: 58.81
GC content: 41.32
Gene sequence:
>1929_bases ATGCCTACTACAAAGAAAAATGAAATTTCTGAAGCTAATGCTATTGAGCTATCAATGGCATTTGATTCCCTAATCTCTGT TGCAGAAGGATTCTCTGATGTGCATCTGGGTGATATGAGTCCTGAAGAAACTTTCGCACATATGCTATCGGTCTTGAAAC TAGCAAAATCGTGCGTCATTGAGATAAAAAATGAGATGGTATCACCAGAACAATCTACAGAGCCATCCCCTCTCCCATTG ATTCAAAGCGTGTTGAACTTCCTAGACAACACACAAAGAGTTATTGAACAATCTATTCGTAATTCCGACTACAGTATACC TAGTGATATCATAGAAGACATACTAAAAGGGTGTTACGATGTTCTAGGAACACTACAAAGTGTTACAAAAGTGCATAGCA TACTGCCAAGTAGTGCTACAGACGTGCCTAATATGCTGGCAGACCAAACTATTATCGCAATGGCTGGTTTTGTACAGGCC TTGCAGAATTACGCATTTAGTTCCACGACAGAACAAGCGGATATAAGACACGTACGACTGCTGACAAGAGCTTCATTAAT CGCACAGCAGGCTATGGCAATGCTTGCGAGTGCTGCTAACCCAGCGGCTCGTAAGTTAGTGCTGCGTCATGTGCTCATCC TCTCACTGACGACCCAAATACCATCTTTAAATACACCTGCTGCTTTGAAGGCGCACATGGCATCAGCCATGAATTTGATA GTGATGTCTCTGTCGGCTGAGCTGGATAAATTCATAAGCTCACGACATGTTATGGAAACCGAAGAGAGTATTTCGATTTC TGTATCAATGCAACATCTAGCTCAACACTTCTTAACTGCTTACCGCGGGGAACTACAAAGGTATTTAGGAAATAAAGTTG ATTTCAGCACTGTAGACCACGAAGCTACTGAAGAAGCTGGAAACTTTGAGAATAATATGCTGTGGATCAGAGCATATTTG CTGGAATGCGTAGTGTATGTTTCCAGCATACAATTGACATATGAAAAAGCATTAGAAAAAACCCTTAAAGATACAGAAGT ATACACGGCTACGCCCGTACTTCTTCCTGAGACACCTTTAACTGAAGATATGGAAATTGAGGAAGACAAGGCAACAGAGA TTATACATGATCTTCATGAATGTGTACTCGAAACCCTAAGGCAGGTATGTTTACGCTGTATTGTCAATTCCTCTCCAGTA TTCGATTCAGATAACAATAGTAAAGATTTACAGCTGAGGATACTTTCACATACTGCAGCTATGCAAGAAAAACTTGGGAA CTTGATTGAGGAACTGCAGAGAAATCCAAATGTTAAAGATTGTCAGTCATTGCACTTCTCTATTGAAAGAGTAGCTATCC TCACTACGAGAATAATGGATAGGCTAGATGACCGTAGAGAGTTATATGACCACACCTGGAAACAGGACTATTCCTTCCTG CCATTGTTCAATGGTGAAGAGCTGCTCAACAGGAAAATATGTAAATCAGATTATCCGACAGCTTTCCGCGATATTGTGGC AAAACAAAAGCAAAGCAATATATGTAGCGCTTTTAAGCATGCGTTCAATTGCGTAATAGAGGCTTTTGTCTGCTGTTACA CAGAAGTAAAGCAATTTTTTGCCAGGGTGATAGCGTGTATAGGAAATGCATTCTGCTGCTCTCCGACTATAAGCGAAGAA GATATGGTAATTGAAGGGAATCCTGATGCAAAATTCGCCACAGAGGAGGAAGAACTACTTGCATTATTAATGGTAGCAGC ATCTCCTGCCAATAGAAGCTCTTCTAGAAACTCAAACGCTCACCCTTCTTCACCTAAGGTGACTGGGCCGATAACCGTAA CTGCAGAAGTACATTCGCAGCTATCAGATGTAACAGCGGAGCGCTGTACTGCAAAAGATTACTCGGAGGAACAAAGCATT GATCTATAG
Upstream 100 bases:
>100_bases TACACGCTTGATTTTGCAAAGTTGGTTTTTGCCTGTTGCCTAGCGCCTTCTGACCTCGCTTGATGATATCTTACATTTTA TAAATGATACCAGGTGGTAT
Downstream 100 bases:
>100_bases ATGATGCGGCGAACGTAAAAGTTATACAATCACTGTAACAGGTTAAACTAGAAAAGTATCAAAGTGTATGGATGAGCCAT TAGGGCACAGTACGGAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MPTTKKNEISEANAIELSMAFDSLISVAEGFSDVHLGDMSPEETFAHMLSVLKLAKSCVIEIKNEMVSPEQSTEPSPLPL IQSVLNFLDNTQRVIEQSIRNSDYSIPSDIIEDILKGCYDVLGTLQSVTKVHSILPSSATDVPNMLADQTIIAMAGFVQA LQNYAFSSTTEQADIRHVRLLTRASLIAQQAMAMLASAANPAARKLVLRHVLILSLTTQIPSLNTPAALKAHMASAMNLI VMSLSAELDKFISSRHVMETEESISISVSMQHLAQHFLTAYRGELQRYLGNKVDFSTVDHEATEEAGNFENNMLWIRAYL LECVVYVSSIQLTYEKALEKTLKDTEVYTATPVLLPETPLTEDMEIEEDKATEIIHDLHECVLETLRQVCLRCIVNSSPV FDSDNNSKDLQLRILSHTAAMQEKLGNLIEELQRNPNVKDCQSLHFSIERVAILTTRIMDRLDDRRELYDHTWKQDYSFL PLFNGEELLNRKICKSDYPTAFRDIVAKQKQSNICSAFKHAFNCVIEAFVCCYTEVKQFFARVIACIGNAFCCSPTISEE DMVIEGNPDAKFATEEEELLALLMVAASPANRSSSRNSNAHPSSPKVTGPITVTAEVHSQLSDVTAERCTAKDYSEEQSI DL
Sequences:
>Translated_642_residues MPTTKKNEISEANAIELSMAFDSLISVAEGFSDVHLGDMSPEETFAHMLSVLKLAKSCVIEIKNEMVSPEQSTEPSPLPL IQSVLNFLDNTQRVIEQSIRNSDYSIPSDIIEDILKGCYDVLGTLQSVTKVHSILPSSATDVPNMLADQTIIAMAGFVQA LQNYAFSSTTEQADIRHVRLLTRASLIAQQAMAMLASAANPAARKLVLRHVLILSLTTQIPSLNTPAALKAHMASAMNLI VMSLSAELDKFISSRHVMETEESISISVSMQHLAQHFLTAYRGELQRYLGNKVDFSTVDHEATEEAGNFENNMLWIRAYL LECVVYVSSIQLTYEKALEKTLKDTEVYTATPVLLPETPLTEDMEIEEDKATEIIHDLHECVLETLRQVCLRCIVNSSPV FDSDNNSKDLQLRILSHTAAMQEKLGNLIEELQRNPNVKDCQSLHFSIERVAILTTRIMDRLDDRRELYDHTWKQDYSFL PLFNGEELLNRKICKSDYPTAFRDIVAKQKQSNICSAFKHAFNCVIEAFVCCYTEVKQFFARVIACIGNAFCCSPTISEE DMVIEGNPDAKFATEEEELLALLMVAASPANRSSSRNSNAHPSSPKVTGPITVTAEVHSQLSDVTAERCTAKDYSEEQSI DL >Mature_641_residues PTTKKNEISEANAIELSMAFDSLISVAEGFSDVHLGDMSPEETFAHMLSVLKLAKSCVIEIKNEMVSPEQSTEPSPLPLI QSVLNFLDNTQRVIEQSIRNSDYSIPSDIIEDILKGCYDVLGTLQSVTKVHSILPSSATDVPNMLADQTIIAMAGFVQAL QNYAFSSTTEQADIRHVRLLTRASLIAQQAMAMLASAANPAARKLVLRHVLILSLTTQIPSLNTPAALKAHMASAMNLIV MSLSAELDKFISSRHVMETEESISISVSMQHLAQHFLTAYRGELQRYLGNKVDFSTVDHEATEEAGNFENNMLWIRAYLL ECVVYVSSIQLTYEKALEKTLKDTEVYTATPVLLPETPLTEDMEIEEDKATEIIHDLHECVLETLRQVCLRCIVNSSPVF DSDNNSKDLQLRILSHTAAMQEKLGNLIEELQRNPNVKDCQSLHFSIERVAILTTRIMDRLDDRRELYDHTWKQDYSFLP LFNGEELLNRKICKSDYPTAFRDIVAKQKQSNICSAFKHAFNCVIEAFVCCYTEVKQFFARVIACIGNAFCCSPTISEED MVIEGNPDAKFATEEEELLALLMVAASPANRSSSRNSNAHPSSPKVTGPITVTAEVHSQLSDVTAERCTAKDYSEEQSID L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71563; Mature: 71432
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTKKNEISEANAIELSMAFDSLISVAEGFSDVHLGDMSPEETFAHMLSVLKLAKSCVI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EIKNEMVSPEQSTEPSPLPLIQSVLNFLDNTQRVIEQSIRNSDYSIPSDIIEDILKGCYD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VLGTLQSVTKVHSILPSSATDVPNMLADQTIIAMAGFVQALQNYAFSSTTEQADIRHVRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LTRASLIAQQAMAMLASAANPAARKLVLRHVLILSLTTQIPSLNTPAALKAHMASAMNLI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VMSLSAELDKFISSRHVMETEESISISVSMQHLAQHFLTAYRGELQRYLGNKVDFSTVDH HHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EATEEAGNFENNMLWIRAYLLECVVYVSSIQLTYEKALEKTLKDTEVYTATPVLLPETPL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCC TEDMEIEEDKATEIIHDLHECVLETLRQVCLRCIVNSSPVFDSDNNSKDLQLRILSHTAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHH MQEKLGNLIEELQRNPNVKDCQSLHFSIERVAILTTRIMDRLDDRRELYDHTWKQDYSFL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLFNGEELLNRKICKSDYPTAFRDIVAKQKQSNICSAFKHAFNCVIEAFVCCYTEVKQFF CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVIACIGNAFCCSPTISEEDMVIEGNPDAKFATEEEELLALLMVAASPANRSSSRNSNA HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC HPSSPKVTGPITVTAEVHSQLSDVTAERCTAKDYSEEQSIDL CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PTTKKNEISEANAIELSMAFDSLISVAEGFSDVHLGDMSPEETFAHMLSVLKLAKSCVI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EIKNEMVSPEQSTEPSPLPLIQSVLNFLDNTQRVIEQSIRNSDYSIPSDIIEDILKGCYD HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH VLGTLQSVTKVHSILPSSATDVPNMLADQTIIAMAGFVQALQNYAFSSTTEQADIRHVRL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH LTRASLIAQQAMAMLASAANPAARKLVLRHVLILSLTTQIPSLNTPAALKAHMASAMNLI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH VMSLSAELDKFISSRHVMETEESISISVSMQHLAQHFLTAYRGELQRYLGNKVDFSTVDH HHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC EATEEAGNFENNMLWIRAYLLECVVYVSSIQLTYEKALEKTLKDTEVYTATPVLLPETPL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCCC TEDMEIEEDKATEIIHDLHECVLETLRQVCLRCIVNSSPVFDSDNNSKDLQLRILSHTAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHH MQEKLGNLIEELQRNPNVKDCQSLHFSIERVAILTTRIMDRLDDRRELYDHTWKQDYSFL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLFNGEELLNRKICKSDYPTAFRDIVAKQKQSNICSAFKHAFNCVIEAFVCCYTEVKQFF CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVIACIGNAFCCSPTISEEDMVIEGNPDAKFATEEEELLALLMVAASPANRSSSRNSNA HHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC HPSSPKVTGPITVTAEVHSQLSDVTAERCTAKDYSEEQSIDL CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA